RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 KLK2P20151 261 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 MPLP40238 635 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 RGS19P49795 217 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 B3GALT5-AS1P59052 145 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 S100A10P60903 97 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 HERV-K104P61576 105 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 PLGLB1Q02325 96 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 OR8B8Q15620 311 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 CEACAM16Q2WEN9 425 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 SNAI3Q3KNW1 292 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 FAM209AQ5JX71 171 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 WIPI1Q5MNZ9 446 aaPredicted RBP6.96□□□□□ -1.3
SMC4-212ENST00000470240 PLCXD3Q63HM9 321 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 ZNF774Q6NX45 483 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 MOB3CQ70IA8 216 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 DPPA2Q7Z7J5 298 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 GGNQ86UU5 652 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 LHFPL1Q86WI0 220 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 OSR2Q8N2R0 312 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 STPG2Q8N412 459 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 ZIC4Q8N9L1 334 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 OR1S1Q8NH92 325 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 FNDC9Q8TBE3 224 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 RNF141Q8WVD5 230 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 SGK3Q96BR1 496 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 FBXO17Q96EF6 278 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 PLPPR2Q96GM1 343 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 LOXL4Q96JB6 756 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 Q96M66 194 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 ALKBH3Q96Q83 286 aaPredicted RBP6.96□□□□□ -1.3
SMC4-212ENST00000470240 SYT3Q9BQG1 590 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 ZNF2Q9BSG1 426 aaPredicted RBP6.96□□□□□ -1.3
SMC4-212ENST00000470240 SOX7Q9BT81 388 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 PRRG4Q9BZD6 226 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 LINC00470Q9BZP3 86 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 OR2H1Q9GZK4 316 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 C5orf66Q9H5L9 145 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 GPR35Q9HC97 309 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 IL36GQ9NZH8 169 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 LRFN1Q9P244 771 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 ZNF230Q9UIE0 474 aaPredicted RBP6.96□□□□□ -1.3
SMC4-212ENST00000470240 OSGIN2Q9Y236 505 aa6.96□□□□□ -1.3
SMC4-212ENST00000470240 MKI67P46013 3256 aaKnown RBP6.95□□□□□ -1.3
SMC4-212ENST00000470240 EML6Q6ZMW3 1958 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 TRBV6-7A0A0A0MS04 114 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 RAB19A4D1S5 217 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 RNF222A6NCQ9 220 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 LRRC3CA6NJW4 275 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 ZNF716A6NP11 495 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 PRSS44E7EML9 344 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 BET1O15155 118 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 KNG1P01042 644 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 SFTPBP07988 381 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 OR5H8P0DN80 308 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 ZNF250P15622 560 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 TMEM50BP56557 158 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 CLDN15P56746 228 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 RPS18P62269 152 aaKnown RBP6.95□□□□□ -1.3
SMC4-212ENST00000470240 SRPXP78539 464 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 PLP2Q04941 152 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 ZSCAN4Q8NAM6 433 aaPredicted RBP6.95□□□□□ -1.3
SMC4-212ENST00000470240 OR13G1Q8NGZ3 307 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 ROBO4Q8WZ75 1007 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 ARL11Q969Q4 196 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 PIK3IP1Q96FE7 263 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 NARS2Q96I59 477 aaKnown RBP6.95□□□□□ -1.3
SMC4-212ENST00000470240 FER1L6-AS2Q96M78 137 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 HIST1H2AAQ96QV6 131 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 REG4Q9BYZ8 158 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 C12orf4Q9NQ89 552 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 ANXA10Q9UJ72 324 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 KLF13Q9Y2Y9 288 aaPredicted RBP6.95□□□□□ -1.3
SMC4-212ENST00000470240 SDK1Q7Z5N4 2213 aa6.95□□□□□ -1.3
SMC4-212ENST00000470240 IGKV3D-15A0A087WSY6 115 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 hCG_38984A0A1B0GV85 526 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A10PA6NDY2 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A18PA6NE21 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A16PA6NEW6 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A8PA6NJQ4 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A7PA6NKC0 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FOXI3A8MTJ6 420 aaPredicted RBP6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A22PA8MWA6 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A12PA8MX19 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A5PA8MXJ8 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A23PA8MXZ1 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 F8VVB4 439 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 F8VWA3 439 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 SDCBPO00560 298 aaPredicted RBP6.94□□□□□ -1.3
SMC4-212ENST00000470240 PDCD6O75340 191 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 DIRAS3O95661 229 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 PLATP00750 562 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 PDGFBP01127 241 aaPredicted RBP6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A15PP0C7V4 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A13PP0C7W8 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A14PP0C7W9 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 FAM90A24PP0C7X0 464 aa6.94□□□□□ -1.3
SMC4-212ENST00000470240 ZNF728P0DKX0 622 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms