RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 MOB1AQ9H8S9 216 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 PLEKHA1Q9HB21 404 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 TMEM100Q9NV29 134 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 SMPD3Q9NY59 655 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 PTTG3PQ9NZH4 202 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF224Q9NZL3 707 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 DNAJC27Q9NZQ0 273 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 LHFPL6Q9Y693 200 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 ABCA4P78363 2273 aa5.26□□□□□ -1.57
PTCD3-208ENST00000469585 UTP20O75691 2785 aaKnown RBP5.26□□□□□ -1.57
PTCD3-208ENST00000469585 NAV2Q8IVL1 2488 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 CENPEQ02224 2701 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 LOC100509620A0A075B734 347 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 A0A1W2PQ09 198 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 DAPL1A0PJW8 107 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 ACOD1A6NK06 481 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 DCTN6O00399 190 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 OGG1O15527 345 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 SPINT2O43291 252 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 PPIHO43447 177 aaKnown RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 TSPAN9O75954 239 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 TPPPO94811 219 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 FADS2O95864 444 aaKnown RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 IGHV4-39P01824 125 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 MRPL3P09001 348 aaKnown RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 OR2T7P0C7T2 308 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 MYL12AP19105 171 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 USF1P22415 310 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 HSPA13P48723 471 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 PRKXP51817 358 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 TMEM33P57088 247 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 CCL8P80075 99 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 IL5RAQ01344 420 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 LRRC36Q1X8D7 754 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 KLHL22Q53GT1 634 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 CCDC92Q53HC0 331 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 BCL2L15Q5TBC7 163 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 SLX4IPQ5VYV7 408 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 TMEM236Q5W0B7 351 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 C11orf71Q6IPW1 123 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 ACSM5Q6NUN0 579 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 PLEKHG7Q6ZR37 379 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 TMEM179BQ7Z7N9 219 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 GLCCI1Q86VQ1 547 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 SLC35F2Q8IXU6 374 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 TIGD4Q8IY51 512 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 DHRSXQ8N5I4 330 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF525Q8N782 197 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 YIPF7Q8N8F6 280 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 OR10H4Q8NGA5 316 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 OR51G2Q8NGK0 314 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 OR2T27Q8NH04 317 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 OTOSQ8NHW6 89 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 FGFBP3Q8TAT2 258 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 ST7LQ8TDW4 575 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 CCL17Q92583 94 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 HAVCR1Q96D42 359 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 CMBLQ96DG6 245 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 TEAD3Q99594 435 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 ABHD6Q9BV23 337 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 REG4Q9BYZ8 158 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 HIPK2Q9H2X6 1198 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 Q9H521 79 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 MED20Q9H944 212 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 FN3KRPQ9HA64 309 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 NTN4Q9HB63 628 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 DDX28Q9NUL7 540 aaKnown RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 USE1Q9NZ43 259 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 PURGQ9UJV8 347 aaKnown RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 PPP1R3CQ9UQK1 317 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 RPL36Q9Y3U8 105 aaKnown RBP5.25□□□□□ -1.57
PTCD3-208ENST00000469585 ADGRG4Q8IZF6 3080 aa5.25□□□□□ -1.57
PTCD3-208ENST00000469585 SETXQ7Z333 2677 aaKnown RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 IGLV3-9A0A075B6K5 115 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 A0A1B0GVI7 797 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 TMEM269A0A1B0GVZ9 245 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 A0A1W2PPR1 153 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 LOC110117498-PIK3R3F6TDL0 507 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 PRKYO43930 277 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 GMDSO60547 372 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 SELENOFO60613 162 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 SERPINA3P01011 423 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 CD8AP01732 235 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 IGFBP1P08833 259 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ACSM4P0C7M7 580 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 CLUP10909 449 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ATP6V1B1P15313 513 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 KITLGP21583 273 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 HTR1FP30939 366 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 CXCR4P61073 352 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MRPL28Q13084 256 aaKnown RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 TNK1Q13470 666 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 IL18R1Q13478 541 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 MAD2L1BPQ15013 274 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 C12orf73Q69YU5 71 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 CYB5R2Q6BCY4 276 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 FAM122CQ6P4D5 195 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 ZNF322Q6U7Q0 402 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-208ENST00000469585 C16orf54Q6UWD8 224 aa5.24□□□□□ -1.57
PTCD3-208ENST00000469585 FBXW12Q6X9E4 464 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms