RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF528Q3MIS6 628 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 SLC25A30Q5SVS4 291 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 TMEM215Q68D42 235 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 PAQR6Q6TCH4 344 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 FUNDC1Q8IVP5 155 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 LOXL4Q96JB6 756 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 C4orf45Q96LM5 186 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 OR2A5Q96R48 311 aa7.77□□□□□ -1.17
HPS4-209ENST00000466781 H3BP45 60 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 PPM1DO15297 605 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 RPL30P62888 115 aaKnown RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 ZNF117Q03924 483 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ACVR1Q04771 509 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 DMRTC1Q5HYR2 192 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 OR2W3Q7Z3T1 314 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 DOLPP1Q86YN1 238 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ISG20L2Q9H9L3 353 aaKnown RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 CELA2BP08218 269 aaPredicted RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 CD37P11049 281 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 HTN1P15515 57 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ZNF26P17031 533 aaPredicted RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 PCMT1P22061 227 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 NHLH1Q02575 133 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 NHLH2Q02577 135 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ZNF793Q6ZN11 406 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 LURAP1Q96LR2 239 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 SLC25A22Q9H936 323 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 RHOFQ9HBH0 211 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 DOK5Q9P104 306 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 TRAPPC1Q9Y5R8 145 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 LANCL1O43813 399 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 NEURL1O76050 574 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ADRB1P08588 477 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 PMCHP20382 165 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 FPR2P25090 351 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 GNG4P50150 75 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 RANP62826 216 aaKnown RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 PAFAH1B2P68402 229 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ASAH1Q13510 395 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 GPNMBQ14956 572 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ZNF141Q15928 474 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 PABPC1L2AQ5JQF8 200 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 PTOV1Q86YD1 416 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 OTOSQ8NHW6 89 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 UBALD1Q8TB05 177 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 C2CD4CQ8TF44 421 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 CHAC2Q8WUX2 184 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 VPS25Q9BRG1 176 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 C12orf10Q9HB07 376 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 CD82P27701 267 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 PTGFRP43088 359 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 PDCD1Q15116 288 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ZNF774Q6NX45 483 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 MRGPREQ86SM8 312 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 EIF4E3Q8N5X7 224 aaKnown RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 C1RLQ9NZP8 487 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ZNF230Q9UIE0 474 aaPredicted RBP7.76□□□□□ -1.17
HPS4-209ENST00000466781 DHRS3O75911 302 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 SP9P0CG40 484 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ACP1P24666 158 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 SRD5A2P31213 254 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ANGPTL6Q8NI99 470 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 ASB13Q8WXK3 278 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 FLVCR2Q9UPI3 526 aa7.76□□□□□ -1.17
HPS4-209ENST00000466781 TMPRSS2O15393 492 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 ZNF207O43670 478 aaKnown RBP7.75□□□□□ -1.17
HPS4-209ENST00000466781 HSBP1O75506 76 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 HTR1DP28221 377 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 SLC38A11Q08AI6 406 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 B3GNTL1Q67FW5 361 aaPredicted RBP7.75□□□□□ -1.17
HPS4-209ENST00000466781 PTPMT1Q8WUK0 201 aaPredicted RBP7.75□□□□□ -1.17
HPS4-209ENST00000466781 MCHR2Q969V1 340 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 CDCA4Q9BXL8 241 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 RNF167Q9H6Y7 350 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 OR1A1Q9P1Q5 309 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 SPAARA0A1B0GVQ0 90 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 SNRPGP15A8MWD9 76 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 C9orf172C9J069 976 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 H3BMH7 237 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 C1QBP02746 253 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 OR5AL1P0C617 328 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 FABP5Q01469 135 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 RPEL1Q2QD12 228 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 SPINK9Q5DT21 86 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 STPG1Q5TH74 334 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 TRBV5-4A0A0C4DH59 114 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 A0A1B0GUH1 482 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 LOC285556D6RIA3 1793 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 SOX15O60248 233 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 ZNF32P17041 273 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 ORM2P19652 201 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 LSM11P83369 360 aaKnown RBP eCLIP7.75□□□□□ -1.17
HPS4-209ENST00000466781 GAMTQ14353 236 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 BAK1Q16611 211 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 TIGD3Q6B0B8 471 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 DHRS11Q6UWP2 260 aa7.75□□□□□ -1.17
HPS4-209ENST00000466781 TGIF2LYQ8IUE0 185 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms