RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 NHLH2Q02577 135 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 FZD2Q14332 565 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 PARM1Q6UWI2 310 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 REC114Q7Z4M0 266 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 UEVLDQ8IX04 471 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 ADPRHL1Q8NDY3 354 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 UCK1Q9HA47 277 aa17.27■□□□□ 0.35
SDF4-205ENST00000465727 RP1P56715 2156 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 HSPB1P04792 205 aaKnown RBP17.26■□□□□ 0.35
SDF4-205ENST00000465727 CTSSP25774 331 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 SFTPDP35247 375 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 FASLGP48023 281 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 NSDHLQ15738 373 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 C6orf201Q7Z4U5 140 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 LYZL2Q7Z4W2 148 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 HIST3H2BBQ8N257 126 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 HAS2Q92819 552 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 S100PBPQ96BU1 408 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 THADAQ6YHU6 1953 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 DNAH14Q0VDD8 3507 aa17.26■□□□□ 0.35
SDF4-205ENST00000465727 TSTD3H0UI37 97 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 SEMA4FO95754 770 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 SRP19P09132 144 aaKnown RBP17.25■□□□□ 0.35
SDF4-205ENST00000465727 TMEM225BP0DP42 221 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 DTYMKP23919 212 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 DLK1P80370 383 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 EWSR1Q01844 656 aaKnown RBP eCLIP17.25■□□□□ 0.353e-8■■■■■ 28.8
SDF4-205ENST00000465727 TFF2Q03403 129 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 LBHQ53QV2 105 aaPredicted RBP17.25■□□□□ 0.35
SDF4-205ENST00000465727 TMEM31Q5JXX7 168 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 SLC35E3Q7Z769 313 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 STX12Q86Y82 276 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 C7orf61Q8IZ16 206 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 OR14L1PQ8NHC6 308 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 TVP23CQ96ET8 276 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 BOD1Q96IK1 185 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 SYT3Q9BQG1 590 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 IGHV5-51A0A0C4DH38 117 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 FAM230AA0A1W2PPH8 454 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 LILRA5A6NI73 299 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 ZNF724A8MTY0 619 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 B4DEV8 164 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 LY86O95711 162 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 PTBP3O95758 552 aaKnown RBP17.25■□□□□ 0.35
SDF4-205ENST00000465727 CXCL1P09341 107 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 RND3P61587 244 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 CDPF1Q6NVV7 123 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 SPSB3Q6PJ21 355 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 SLC25A47Q6Q0C1 308 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 OR2G3Q8NGZ4 309 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 RNASE11Q8TAA1 199 aaKnown RBP17.25■□□□□ 0.35
SDF4-205ENST00000465727 M1APQ8TC57 530 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 C10orf35Q96D05 121 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 Q96M66 194 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 PIGQQ9BRB3 760 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 NIPSNAP3BQ9BS92 247 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 ANGPTL4Q9BY76 406 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 HIPK2Q9H2X6 1198 aa17.25■□□□□ 0.35
SDF4-205ENST00000465727 RCL1Q9Y2P8 373 aaKnown RBP17.25■□□□□ 0.35
SDF4-205ENST00000465727 OR5H15A6NDH6 313 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 OR5H1A6NKK0 313 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 ETV2O00321 342 aaPredicted RBP17.24■□□□□ 0.35
SDF4-205ENST00000465727 RER1O15258 196 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 PITX3O75364 302 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 GLIPR1P48060 266 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 SP6Q3SY56 376 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 OGFOD3Q6PK18 319 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 SPNS3Q6ZMD2 512 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 ZNF429Q86V71 674 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 CCDC54Q8NEL0 328 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 MSI2Q96DH6 328 aaKnown RBP17.24■□□□□ 0.35
SDF4-205ENST00000465727 NUDT22Q9BRQ3 303 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 GPR27Q9NS67 375 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 HSF4Q9ULV5 492 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 V9GYS6 101 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 TDRD6O60522 2096 aaKnown RBP17.24■□□□□ 0.35
SDF4-205ENST00000465727 A0A0U1RQV5 110 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 A0A1B0GV50 99 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 ARGFXA6NJG6 315 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 ZNF727A8MUV8 499 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 C10orf142B7Z368 130 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 HSPA12AO43301 675 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 DHRS3O75911 302 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 THEGLP0DJG4 465 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 FCGR2AP12318 317 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 DDTP30046 118 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 ERVFRD-1P60508 538 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 RSU1Q15404 277 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 ZNF506Q5JVG8 444 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 TMEM240Q5SV17 173 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 SLC22A25Q6T423 547 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 FBXL14Q8N1E6 418 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 OR2C3Q8N628 320 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 OR52M1Q8NGK5 317 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 OR4D5Q8NGN0 318 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.24■□□□□ 0.35
SDF4-205ENST00000465727 TOMM40LQ969M1 308 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 PGAM5Q96HS1 289 aa17.24■□□□□ 0.35
SDF4-205ENST00000465727 RPP25Q9BUL9 199 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms