RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 A0A1W2PPH5 198 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 SLC1A7O00341 560 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 GNGT2O14610 69 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ATP8B1O43520 1251 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 SYNGR1O43759 233 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 NRASP01111 189 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 PF4P02776 101 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 PF4V1P10720 104 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 OSMP13725 252 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ATP6V1B1P15313 513 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 CCL3L1P16619 93 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 FAHP16930 419 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 COX7A1P24310 79 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 CEBPDP49716 269 aaPredicted RBP7.84□□□□□ -1.15
USP39-212ENST00000465514 LGALS4P56470 323 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 GNGT1P63211 74 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 APOFQ13790 326 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 HABP2Q14520 560 aaPredicted RBP7.84□□□□□ -1.15
USP39-212ENST00000465514 SMIM21Q3B7S5 101 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ZNF684Q5T5D7 378 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 TMEM236Q5W0B7 351 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 KCTD18Q6PI47 426 aaPredicted RBP7.84□□□□□ -1.15
USP39-212ENST00000465514 DEGS2Q6QHC5 323 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ADGRG5Q8IZF4 528 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 HS3ST5Q8IZT8 346 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ZNF561Q8N587 486 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 POC1AQ8NBT0 407 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 Q8NFD4 153 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 DPF1Q92782 380 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ITFG2Q969R8 447 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 RBMXL1Q96E39 390 aaKnown RBP7.84□□□□□ -1.15
USP39-212ENST00000465514 LRGUKQ96M69 825 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 TEAD3Q99594 435 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 NKX3-1Q99801 234 aaPredicted RBP7.84□□□□□ -1.15
USP39-212ENST00000465514 MROQ9BYG7 248 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 YIPF3Q9GZM5 350 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 NPFFR1Q9GZQ6 430 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ZNF556Q9HAH1 456 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 SERTAD4Q9NUC0 356 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 ENPP5Q9UJA9 477 aa7.84□□□□□ -1.15
USP39-212ENST00000465514 hCG_1809904A0A1W2PP81 198 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 A0A1W2PPE2 198 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 A0A1W2PR64 198 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 A0A1W2PRV1 198 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 PRR32B1ATL7 298 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ZNF254O75437 659 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 NXPH2O95156 264 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 DUS4LO95620 317 aaKnown RBP7.83□□□□□ -1.16
USP39-212ENST00000465514 IGLV3-1P01715 115 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 MRPL3P09001 348 aaKnown RBP7.83□□□□□ -1.16
USP39-212ENST00000465514 PGA5P0DJD9 388 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 PRKACGP22612 351 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 HAAOP46952 286 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 RAB13P51153 203 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ZNF273Q14593 569 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 PLA1AQ53H76 456 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ZFAND6Q6FIF0 208 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ADAMTSL5Q6ZMM2 481 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ZNF782Q6ZMW2 699 aaPredicted RBP7.83□□□□□ -1.16
USP39-212ENST00000465514 LHFPL4Q7Z7J7 247 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ZNF573Q86YE8 665 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 BATF2Q8N1L9 274 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 DYNAPQ8N1N2 210 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 DTX3Q8N9I9 347 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 WIPF2Q8TF74 440 aaPredicted RBP7.83□□□□□ -1.16
USP39-212ENST00000465514 CCDC124Q96CT7 223 aaKnown RBP7.83□□□□□ -1.16
USP39-212ENST00000465514 ASB9Q96DX5 294 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ASCL2Q99929 193 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 TEX12Q9BXU0 123 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 TTTY10Q9BZA0 68 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 C1orf21Q9H246 121 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 ZNF702PQ9H963 129 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 USE1Q9NZ43 259 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 COPS3Q9UNS2 423 aa7.83□□□□□ -1.16
USP39-212ENST00000465514 RBMY1BA6NDE4 496 aaKnown RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 RBMY1EA6NEQ0 496 aaKnown RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 CCDC182A6NF36 153 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 FAM90A8PA6NJQ4 464 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 VGLL3A8MV65 326 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 J3QT63 122 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 NOS1APO75052 506 aaPredicted RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 E2F6O75461 281 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 DHRS3O75911 302 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 ZFPL1O95159 310 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 TTRP02766 147 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 TK1P04183 234 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 CHRM2P08172 466 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 RBMY1DP0C7P1 496 aaKnown RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 PIPP12273 146 aaPredicted RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 RIDAP52758 137 aaKnown RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 DLX6P56179 175 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 ESRRGP62508 458 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 ROM1Q03395 351 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 MFGE8Q08431 387 aaPredicted RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 SNAPC1Q16533 368 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 ZNF829Q3KNS6 432 aaPredicted RBP7.82□□□□□ -1.16
USP39-212ENST00000465514 CLVS2Q5SYC1 327 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 ASRGL1Q7L266 308 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 CALHM1Q8IU99 346 aa7.82□□□□□ -1.16
USP39-212ENST00000465514 ZNF679Q8IYX0 411 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms