RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CEACAM21Q3KPI0 293 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 CLVS2Q5SYC1 327 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 Q6ZSV7 163 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 KCTD8Q6ZWB6 473 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 MOB3CQ70IA8 216 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 FAM220AQ7Z4H9 259 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 LHFPL3Q86UP9 236 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 C1QL4Q86Z23 238 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 RDH10Q8IZV5 341 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF555Q8NEP9 628 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR5A2Q8NGI9 324 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR10AC1Q8NH08 325 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 RPS4Y2Q8TD47 263 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 FBLIM1Q8WUP2 373 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 NRG4Q8WWG1 115 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 CYGBQ8WWM9 190 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 RNF170Q96K19 258 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 C4orf36Q96KX1 117 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 WDFY2Q96P53 400 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 TECTBQ96PL2 329 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 ADI1Q9BV57 179 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 ALG8Q9BVK2 526 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 JAM3Q9BX67 310 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 WDR13Q9H1Z4 485 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 ISG20L2Q9H9L3 353 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 FGF20Q9NP95 211 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 ERVK13-1Q9NX77 482 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 FRRS1LQ9P0K9 344 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 KAAG1Q9UBP8 84 aa6.51□□□□□ -1.37
CDC42BPA-210ENST00000462553 IGKV1-27A0A075B6S5 117 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 A0A1B0GVI7 797 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 PQLC2LA1A4F0 135 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ERICH4A6NGS2 130 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 SNTNA6NMZ2 147 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR4C45A6NMZ5 311 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 E9PI62 339 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 J3QLW9 94 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 AKR7A2O43488 359 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ADAM20O43506 726 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 SYT7O43581 403 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 SYNGR1O43759 233 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 MTRF1O75570 445 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF19P17023 458 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 MPZP25189 248 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 CAPGP40121 348 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ACTA2P62736 377 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ACTG2P63267 376 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ALKBH1Q13686 389 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 DOC2BQ14184 412 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 UBE2V2Q15819 145 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 KCNJ8Q15842 424 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 TAF9Q16594 264 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 TTC23Q5W5X9 447 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 THAP5Q7Z6K1 395 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 SYS1Q8N2H4 156 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 DHRSXQ8N5I4 330 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 FAM216BQ8N7L0 139 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZSCAN4Q8NAM6 433 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 OR51A4Q8NGJ6 313 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 AQP3Q92482 292 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 LHX4Q969G2 390 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ADAT3Q96EY9 351 aaPredicted RBP6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF488Q96MN9 340 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 Q96MT0 163 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 GAFA1Q96PS6 74 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 CHST5Q9GZS9 411 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 RASSF4Q9H2L5 321 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 DCLRE1BQ9H816 532 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 TRIM36Q9NQ86 728 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 INPP5EQ9NRR6 644 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF222Q9UK12 451 aa6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 RPL36Q9Y3U8 105 aaKnown RBP6.5□□□□□ -1.37
CDC42BPA-210ENST00000462553 IGKV1D-17A0A075B6S4 117 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 IGKV1-9A0A0C4DH69 117 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 H0YAE9 185 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 J3QT63 122 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 NDUFA2O43678 99 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 FADS2O95864 444 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ISG15P05161 165 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 LIPFP07098 398 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 HTR1AP08908 422 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 PGA5P0DJD9 388 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 MUC1P15941 1255 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 TGM4P49221 684 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ETV1P50549 477 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 CCR9P51686 369 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 AQP4P55087 323 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 GMFBP60983 142 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 SLC34A1Q06495 639 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 IL18R1Q13478 541 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 MICBQ29980 383 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ATPAF1Q5TC12 328 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 METTL11BQ5VVY1 283 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 CD276Q5ZPR3 534 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 XAF1Q6GPH4 301 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 HAGHLQ6PII5 290 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 CRIP3Q6Q6R5 217 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 ZNF788Q6ZQV5 615 aa6.49□□□□□ -1.37
CDC42BPA-210ENST00000462553 KCTD20Q7Z5Y7 419 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms