RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 LINC00596Q86U02 117 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 HOGA1Q86XE5 327 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 C11orf53Q8IXP5 236 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 OSR2Q8N2R0 312 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 ACBD4Q8NC06 268 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 NUP37Q8NFH4 326 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 OR1J1Q8NGS3 322 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 SLC25A40Q8TBP6 338 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 GCDHQ92947 438 aaPredicted RBP6.39□□□□□ -1.39
ERCC3-204ENST00000456257 UPRTQ96BW1 309 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 RNF170Q96K19 258 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 HIST1H2AAQ96QV6 131 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 SLC25A21Q9BQT8 299 aaPredicted RBP6.39□□□□□ -1.39
ERCC3-204ENST00000456257 NICN1Q9BSH3 213 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 TRAF4Q9BUZ4 470 aaPredicted RBP6.39□□□□□ -1.39
ERCC3-204ENST00000456257 PAPOLGQ9BWT3 736 aaKnown RBP6.39□□□□□ -1.39
ERCC3-204ENST00000456257 PECRQ9BY49 303 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 CHST6Q9GZX3 395 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 MMP28Q9H239 520 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 DPAGT1Q9H3H5 408 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 DECR2Q9NUI1 292 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 MTCH1Q9NZJ7 389 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 RCC2Q9P258 522 aaKnown RBP6.39□□□□□ -1.39
ERCC3-204ENST00000456257 MYEF2Q9P2K5 600 aaKnown RBP6.39□□□□□ -1.39
ERCC3-204ENST00000456257 GPR160Q9UJ42 338 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 ELF5Q9UKW6 265 aaPredicted RBP6.39□□□□□ -1.39
ERCC3-204ENST00000456257 EDARQ9UNE0 448 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 ATMQ13315 3056 aa6.39□□□□□ -1.39
ERCC3-204ENST00000456257 TRBV6-6A0A0A6YYG2 114 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 LINC00854A0A1B0GVQ3 168 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 TMEM235A6NFC5 223 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 J3QT63 122 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ANGPTL7O43827 346 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 PRAF2O60831 178 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 PFDN1O60925 122 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 CD3DP04234 171 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 THBDP07204 575 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ADH4P08319 380 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 GNB3P16520 340 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 CA6P23280 308 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 PTAFRP25105 342 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 CD40P25942 277 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 FAUP35544 74 aaKnown RBP6.38□□□□□ -1.39
ERCC3-204ENST00000456257 MPV17P39210 176 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 NPBWR2P48146 333 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 IL13RA2Q14627 380 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 MEF2DQ14814 521 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 MSMPQ1L6U9 139 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 MPV17LQ2QL34 196 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 PCGF3Q3KNV8 242 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ALKBH6Q3KRA9 238 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 DMRTC1Q5HYR2 192 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 Q6ZR03 302 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 SLC25A26Q70HW3 274 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 WDR86Q86TI4 376 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ZNF554Q86TJ5 538 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 FJX1Q86VR8 437 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 FBXL14Q8N1E6 418 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ZNF611Q8N823 705 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 OR4C16Q8NGL9 310 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 OR13G1Q8NGZ3 307 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 OR6F1Q8NGZ6 308 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ENKURQ8TC29 256 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 NPRL2Q8WTW4 380 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 TMEM171Q8WVE6 324 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 FBXW5Q969U6 566 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ARHGAP5-AS1Q96IT6 56 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 S100A13Q99584 98 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 MICU1Q9BPX6 476 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 NRIP2Q9BQI9 281 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 RTL8AQ9BWD3 113 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 C1QTNF6Q9BXI9 259 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 HES4Q9HCC6 221 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 TMEM100Q9NV29 134 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 ZNF221Q9UK13 617 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 SPEF1Q9Y4P9 236 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 SHANK1Q9Y566 2161 aa6.38□□□□□ -1.39
ERCC3-204ENST00000456257 hCG_2014768A0A024R1R8 64 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 A0A1B0GUH1 482 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 SNRPGP15A8MWD9 76 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 ZNF736B4DX44 427 aaPredicted RBP6.37□□□□□ -1.39
ERCC3-204ENST00000456257 MLNRO43193 412 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 SPRY1O43609 319 aaPredicted RBP6.37□□□□□ -1.39
ERCC3-204ENST00000456257 PDCD6O75340 191 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 HTR3BO95264 441 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 RAB3DO95716 219 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 CYB5AP00167 134 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 DHFRP00374 187 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 CRYAAP02489 173 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 MT-ND4P03905 459 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 CSTBP04080 98 aaKnown RBP6.37□□□□□ -1.39
ERCC3-204ENST00000456257 H2AFB2P0C5Z0 115 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 BMP5P22003 454 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 LMO1P25800 156 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 CHRNB4P30926 498 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 HAAOP46952 286 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 GPM6AP51674 278 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 CCR6P51684 374 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 PRSS12P56730 875 aa6.37□□□□□ -1.39
ERCC3-204ENST00000456257 ERVS71-1P61550 626 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms