RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 OR2G2Q8NGZ5 317 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 RTP3Q9BQQ7 232 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 NAA60Q9H7X0 242 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 PLEKHB1Q9UF11 243 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 WIPI2Q9Y4P8 454 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 A0A087WWC5 75 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 BCAT2O15382 392 aaPredicted RBP4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CCL16O15467 120 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 AKR7A2O43488 359 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SEMG1P04279 462 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 NAT1P18440 290 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 CD82P27701 267 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OR7A5Q15622 319 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 GUCA2BQ16661 112 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 SUSD1Q6UWL2 747 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 ZFP41Q8N8Y5 198 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 OR1N1Q8NGS0 311 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 C2CD4CQ8TF44 421 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 TIMM9Q9Y5J7 89 aa4.7□□□□□ -1.66
CSMD3-204ENST00000455883 M0R135 149 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 RER1O15258 196 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SP1P08047 785 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ATXN8OSP0DMR3 200 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SLC25A6P12236 298 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 TBXA2RP21731 343 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SHBQ15464 509 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ODF4Q2M2E3 257 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PIP5KL1Q5T9C9 394 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 VWA1Q6PCB0 445 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 HMGCLL1Q8TB92 370 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 MZB1Q8WU39 189 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SARAFQ96BY9 339 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF799Q96GE5 643 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 CD84Q9UIB8 345 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ODAMA1E959 279 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 RECKO95980 971 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SSTR4P31391 388 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PCBP4P57723 403 aaKnown RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 HLA-DRB3P79483 266 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PMS2P11Q13670 270 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 DEFB115Q30KQ5 88 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SLC7A5P1Q8MH63 180 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 RXFP4Q8TDU9 374 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 MYOZ1Q9NP98 299 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 TRA2AQ13595 282 aaKnown RBP eCLIP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 MRPL58Q14197 206 aaKnown RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 CCSMST1Q4G0I0 132 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SLC16A12Q6ZSM3 486 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 FADS6Q8N9I5 356 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 IL1F10Q8WWZ1 152 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 RND1Q92730 232 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 NRIP2Q9BQI9 281 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 TAAR3PQ9P1P4 343 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ARL2-SNX15V9GYD0 113 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 A0A0U1RQK1 487 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SLC37A1P57057 533 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 POLR2GP62487 172 aaKnown RBP eCLIP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 RPS26P62854 115 aaKnown RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 CCDC144NLQ6NUI1 221 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 FAM71F2Q6NXP2 309 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 STAC2Q6ZMT1 411 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SYT9Q86SS6 491 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 MS4A7Q9GZW8 240 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 GDF2Q9UK05 429 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PRNDQ9UKY0 176 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PPP1R3CQ9UQK1 317 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 HOXC11O43248 304 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 CSF2RBP32927 897 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 NHLH1Q02575 133 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 GPNMBQ14956 572 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 Q1RN00 199 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PRAMEF5Q5TYX0 476 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PRAMEF6Q5VXH4 476 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 DMRTA1Q5VZB9 504 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM81Q6P7N7 255 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 C6orf201Q7Z4U5 140 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 RIMKLAQ8IXN7 391 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM45BQ96B21 275 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 MIEN1Q9BRT3 115 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF320A2RRD8 509 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 FGF18O76093 207 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 CBX7O95931 251 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SEMG2Q02383 582 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 TMEM268Q5VZI3 342 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 OR10G8Q8NGN5 311 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ZNF845Q96IR2 970 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 HHIPL1Q96JK4 782 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SF3B5Q9BWJ5 86 aaKnown RBP4.69□□□□□ -1.66
CSMD3-204ENST00000455883 DECR2Q9NUI1 292 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 IL19Q9UHD0 177 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PRSS38A1L453 326 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 TAPBPO15533 448 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 IL11RAQ14626 422 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 SAPCD1Q5SSQ6 148 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 AAED1Q7RTV5 226 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 OR2C3Q8N628 320 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 PNPLA1Q8N8W4 532 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 OR5R1Q8NH85 324 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 ARRDC2Q8TBH0 407 aa4.69□□□□□ -1.66
CSMD3-204ENST00000455883 DYRK2Q92630 601 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms