RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 RTBDNQ9BSG5 229 aaPredicted RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 H2AFY2Q9P0M6 372 aaPredicted RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 NLKQ9UBE8 527 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 VSIG4Q9Y279 399 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 EMC9Q9Y3B6 208 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 PRRC2AP48634 2157 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 A6NIN4 97 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 M0R135 149 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 EEF1E1O43324 174 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 AGFG2O95081 481 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 ECDO95905 644 aaPredicted RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 HIST1H2ABP04908 130 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 CD3GP09693 182 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 CXCL2P19875 107 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 AZGP1P25311 298 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 GIFP27352 417 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 GLRXP35754 106 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 PPOXP50336 477 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 RPS7P62081 194 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 RAB1AP62820 205 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 IL24Q13007 206 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 FCN2Q15485 313 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 CEACAM21Q3KPI0 293 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 CARD17Q5XLA6 110 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 ZNF585AQ6P3V2 769 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 HIST3H2AQ7L7L0 130 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 TMEM185AQ8NFB2 350 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 OR1M1Q8NGA1 313 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 OR52H1Q8NGJ2 320 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 OR6N2Q8NGY6 317 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 HIST1H2ACQ93077 130 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 MRPL24Q96A35 216 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 MBD6Q96DN6 1003 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 ZNF799Q96GE5 643 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 NRIP2Q9BQI9 281 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 MRPL37Q9BZE1 423 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 ACTR6Q9GZN1 396 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 CACYBPQ9HB71 228 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 CHCHD3Q9NX63 227 aaKnown RBP4.17□□□□□ -1.74
RIF1-207ENST00000454583 MTCH1Q9NZJ7 389 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 PROCRQ9UNN8 238 aa4.17□□□□□ -1.74
RIF1-207ENST00000454583 TET2Q6N021 2002 aaPredicted RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 CDC14BO60729 498 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 ZNF737O75373 536 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 SYNGR4O95473 234 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 CLDN14O95500 239 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 FSHBP01225 129 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 KRT8P05787 483 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 PGA5P0DJD9 388 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 NR2C1P13056 603 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 RPL4P36578 427 aaKnown RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 CLDN12P56749 244 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 RPS27AP62979 156 aaKnown RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 HOXA4Q00056 320 aaPredicted RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 IL18Q14116 193 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 HLXQ14774 488 aaPredicted RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 PYDC2Q56P42 97 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 FAHD2BQ6P2I3 314 aaPredicted RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 GSG1LQ6UXU4 331 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 DOK3Q7L591 496 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 SLC25A42Q86VD7 318 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 ODF3L1Q8IXM7 274 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 TMEM104Q8NE00 496 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 SLC30A7Q8NEW0 376 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 OR6K6Q8NGW6 343 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 C8orf46Q8TAG6 207 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 NEUROG1Q92886 237 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 FAHD2AQ96GK7 314 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 RADILQ96JH8 1075 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 GON7Q9BXV9 100 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 OPA3Q9H6K4 179 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 C12orf49Q9H741 205 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 HSF4Q9ULV5 492 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 CNOT1A5YKK6 2376 aaKnown RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 ATRXP46100 2492 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 ZANQ9Y493 2812 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 A0A1W2PPK0 400 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 ZSCAN5BA6NJL1 495 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 HMSDA8MTL9 139 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 PYCARD-AS1I3L0S3 204 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 PRAF2O60831 178 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 NAPSAO96009 420 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 IGHV3-9P01782 118 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 MT-ND4P03905 459 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 LPLP06858 475 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 HTR2CP28335 458 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 RIDAP52758 137 aaKnown RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 NKX2-5P52952 324 aaPredicted RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 MRPS11P82912 194 aaKnown RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 SCRN3Q0VDG4 424 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 ZMYND11Q15326 602 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 ZNF704Q6ZNC4 412 aaPredicted RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 SERPINA12Q8IW75 414 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 LRRC18Q8N456 261 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 LY6G5BQ8NDX9 201 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 OR5D14Q8NGL3 314 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 FOXRED1Q96CU9 486 aaPredicted RBP4.16□□□□□ -1.74
RIF1-207ENST00000454583 RBP7Q96R05 134 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 NICN1Q9BSH3 213 aa4.16□□□□□ -1.74
RIF1-207ENST00000454583 PKIBQ9C010 78 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms