RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SAC3D1A6NKF1 404 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 H3BSH0 61 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 NOS1APO75052 506 aaPredicted RBP10.55□□□□□ -0.72
CHD3-206ENST00000452447 CCL1P22362 96 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 RPL31P62899 125 aaKnown RBP10.55□□□□□ -0.72
CHD3-206ENST00000452447 TAF9Q16594 264 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 DHRS7BQ6IAN0 325 aaPredicted RBP10.55□□□□□ -0.72
CHD3-206ENST00000452447 FAM220AQ7Z4H9 259 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 CATSPERDQ86XM0 798 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 PNKDQ8N490 385 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 CD177Q8N6Q3 437 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 TRMT10AQ8TBZ6 339 aaKnown RBP10.55□□□□□ -0.72
CHD3-206ENST00000452447 PYDC1Q8WXC3 89 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 RORBQ92753 470 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 EME1Q96AY2 570 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 IMPAD1Q9NX62 359 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 OR14J1Q9UGF5 321 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 RRP15Q9Y3B9 282 aaKnown RBP10.55□□□□□ -0.72
CHD3-206ENST00000452447 ORC6Q9Y5N6 252 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 DSCAML1Q8TD84 2053 aa10.55□□□□□ -0.72
CHD3-206ENST00000452447 ANGPTL7O43827 346 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 GATBO75879 557 aaKnown RBP10.54□□□□□ -0.72
CHD3-206ENST00000452447 SERPINA3P01011 423 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 MPZP25189 248 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 CEBPDP49716 269 aaPredicted RBP10.54□□□□□ -0.72
CHD3-206ENST00000452447 SRSF4Q08170 494 aaKnown RBP10.54□□□□□ -0.72
CHD3-206ENST00000452447 Q6ZSR3 168 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 ANGPTL5Q86XS5 388 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 CALHM1Q8IU99 346 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 BATF2Q8N1L9 274 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 CCDC54Q8NEL0 328 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 OR5R1Q8NH85 324 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 TRUB1Q8WWH5 349 aaKnown RBP10.54□□□□□ -0.72
CHD3-206ENST00000452447 NRIP2Q9BQI9 281 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 C19orf12Q9NSK7 152 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 GNG8Q9UK08 70 aa10.54□□□□□ -0.72
CHD3-206ENST00000452447 FUT6P51993 359 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 IL24Q13007 206 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 OR4M1Q8NGD0 313 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 LINC01006Q8NI28 216 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 PKIBQ9C010 78 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 FAM234AQ9H0X4 552 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 HEXA-AS1Q9H8Q6 139 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 KIAA2026Q5HYC2 2103 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 MEGF8Q7Z7M0 2845 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 NOTCH1P46531 2555 aa10.53□□□□□ -0.72
CHD3-206ENST00000452447 TK1P04183 234 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 UBCP0CG48 685 aaKnown RBP10.52□□□□□ -0.72
CHD3-206ENST00000452447 TGFBR2P37173 567 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 UBE2V2Q15819 145 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 MIDNQ504T8 468 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 TMEM200BQ69YZ2 307 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 MKXQ8IYA7 352 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 ASCC1Q8N9N2 400 aaKnown RBP10.52□□□□□ -0.72
CHD3-206ENST00000452447 ZSCAN4Q8NAM6 433 aaPredicted RBP10.52□□□□□ -0.72
CHD3-206ENST00000452447 BEND2Q8NDZ0 799 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 C10orf35Q96D05 121 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 BORCS8Q96FH0 119 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 CITED1Q99966 193 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 CHST5Q9GZS9 411 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 HES4Q9HCC6 221 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 VWFP04275 2813 aa10.52□□□□□ -0.72
CHD3-206ENST00000452447 ANKRD65E5RJM6 399 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 TIMM23O14925 209 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 INMTO95050 263 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 ALPLP05186 524 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 ERVK11-1P61568 191 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 ACTC1P68032 377 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 ACTA1P68133 377 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 KPNB1Q14974 876 aaKnown RBP10.52□□□□□ -0.73
CHD3-206ENST00000452447 CNN3Q15417 329 aaKnown RBP10.52□□□□□ -0.73
CHD3-206ENST00000452447 TP53I3Q53FA7 332 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 Q6ZSV7 163 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 PRSS35Q8N3Z0 413 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 PP6455Q8WZ26 134 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 UBE2FQ969M7 185 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 HRASLS5Q96KN8 279 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 CEP19Q96LK0 163 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 SSX3Q99909 188 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 USE1Q9NZ43 259 aa10.52□□□□□ -0.73
CHD3-206ENST00000452447 LOC107986453A0A1B0GWG9 222 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 SNTNA6NMZ2 147 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 H3BUX3 64 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 K7N7A8 449 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 M0QZ24 198 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 EI24O14681 340 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 ENTPD6O75354 484 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 CLPXO76031 633 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 CHRM2P08172 466 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 PIPP12273 146 aaPredicted RBP10.51□□□□□ -0.73
CHD3-206ENST00000452447 LGALS4P56470 323 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 COL10A1Q03692 680 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 ZNF85Q03923 595 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 ZIK1Q3SY52 487 aaPredicted RBP10.51□□□□□ -0.73
CHD3-206ENST00000452447 TMEM244Q5VVB8 128 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 MEDAGQ5VYS4 303 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 HCP5Q6MZN7 132 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 SLC25A26Q70HW3 274 aa10.51□□□□□ -0.73
CHD3-206ENST00000452447 GDPD3Q7L5L3 318 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms