RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TRAPPC2BP0DI82 140 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 ATF1P18846 271 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 PRKACBP22694 351 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 CD80P33681 288 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 NPY4RP50391 375 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 ATP1B3P54709 279 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 TAS2R43P59537 309 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 GNB2P62879 340 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 HNRNPA0Q13151 305 aaKnown RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 SPHARQ15513 63 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 MED22Q15528 200 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 CHRFAM7AQ494W8 412 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 OR2G6Q5TZ20 316 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 TEX36Q5VZQ5 186 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 CD276Q5ZPR3 534 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 FAHD2BQ6P2I3 314 aaPredicted RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 HAGHLQ6PII5 290 aaPredicted RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 UTS2BQ765I0 119 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 CCDC190Q86UF4 302 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 LYSMD2Q8IV50 215 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 SERPINA12Q8IW75 414 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 NANOGP1Q8N7R0 232 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 DNAAF1Q8NEP3 725 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 OR5D14Q8NGL3 314 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 AQP3Q92482 292 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 BORCS8Q96FH0 119 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 FAHD2AQ96GK7 314 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 CHST5Q9GZS9 411 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 C6orf62Q9GZU0 229 aaPredicted RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 NDUFB11Q9NX14 153 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 DNAJB11Q9UBS4 358 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 CLEC2DQ9UHP7 191 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 SSR3Q9UNL2 185 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 DHDHQ9UQ10 334 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 POLDIP2Q9Y2S7 368 aa7.43□□□□□ -1.22
COL8A1-203ENST00000452013 LSM2Q9Y333 95 aaKnown RBP7.43□□□□□ -1.22
COL8A1-203ENST00000452013 A0A0G2JMP0 313 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 A0A0X1KG70 313 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 SRRM5B3KS81 715 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 J3QT63 122 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 TNFRSF13BO14836 293 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 ADAM20O43506 726 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 NOS1APO75052 506 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 CYB5AP00167 134 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 GYPAP02724 150 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 CD2P06729 351 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 GLRA1P23415 457 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 RBMXP38159 391 aaKnown RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 HAAOP46952 286 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 PITPNBP48739 271 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 RBP2P50120 134 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 LSM3P62310 102 aaKnown RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 LCN2P80188 198 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 ACSM1Q08AH1 577 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 CDK5R1Q15078 307 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 UBE2V2Q15819 145 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 NDUFA5Q16718 116 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 CR1LQ2VPA4 569 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 DMRTC1Q5HYR2 192 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 FAM120AOSQ5T036 256 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 ATPAF1Q5TC12 328 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 DCAF12L2Q5VW00 463 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 METAP1DQ6UB28 335 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 LYPD2Q6UXB3 125 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 SLC36A1Q7Z2H8 476 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 MKXQ8IYA7 352 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 C19orf18Q8NEA5 215 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 OR4M2Q8NGB6 313 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 GPR148Q8TDV2 347 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 TSEN15Q8WW01 171 aaKnown RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 SPSB1Q96BD6 273 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 ADAT3Q96EY9 351 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 MED30Q96HR3 178 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 SSBP3Q9BWW4 388 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 PKIBQ9C010 78 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 FGF23Q9GZV9 251 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 DNTTIP1Q9H147 329 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 ZCCHC4Q9H5U6 513 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 KAAG1Q9UBP8 84 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 CLN8Q9UBY8 286 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 OR5V1Q9UGF6 321 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 GSTK1Q9Y2Q3 226 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 ZNF281Q9Y2X9 895 aa7.42□□□□□ -1.22
COL8A1-203ENST00000452013 POLR3KQ9Y2Y1 108 aaPredicted RBP7.42□□□□□ -1.22
COL8A1-203ENST00000452013 ITPR3Q14573 2671 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 HIVEP1P15822 2718 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 LOC105371242A0A075B767 164 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 IGHV3OR15-7A0A075B7D8 119 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 LOC100506127A0A0U1RQW1 187 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 A8MXK9 166 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 GPR37O15354 613 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 TMPRSS2O15393 492 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 AKR7A2O43488 359 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 NDUFB3O43676 98 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 ALX3O95076 343 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 ECDO95905 644 aaPredicted RBP7.41□□□□□ -1.22
COL8A1-203ENST00000452013 IFNA2P01563 188 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 CD1AP06126 327 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 LIPFP07098 398 aa7.41□□□□□ -1.22
COL8A1-203ENST00000452013 HSMCR30P0CW71 290 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms