RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ARMC10Q8N2F6 343 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF561Q8N587 486 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 MARS2Q96GW9 593 aaKnown RBP10.55□□□□□ -0.72
COL27A1-202ENST00000451716 SUCNR1Q9BXA5 334 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 ARL6Q9H0F7 186 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 FN3KRPQ9HA64 309 aa10.55□□□□□ -0.72
COL27A1-202ENST00000451716 COL27A1Q8IZC6 1860 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-202ENST00000451716 GJE1A6NN92 205 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 C1orf196B1AJZ1 125 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 DHRS3O75911 302 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 HPP00738 406 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 IGHEP01854 428 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 IFNA6P05013 189 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 CELA3AP09093 270 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 SP9P0CG40 484 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 PPP3CBP16298 524 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 HIST1H1DP16402 221 aaKnown RBP10.54□□□□□ -0.72
COL27A1-202ENST00000451716 CTSSP25774 331 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 DHODHQ02127 395 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 TNFRSF9Q07011 255 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 HABP2Q14520 560 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-202ENST00000451716 MEF2DQ14814 521 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 C3P1Q6ZMU1 363 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 AAED1Q7RTV5 226 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 OR51T1Q8NGJ9 327 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 OR4K15Q8NH41 348 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 FGFBP3Q8TAT2 258 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 PRRT1Q99946 306 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 STRADBQ9C0K7 418 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 SIRT7Q9NRC8 400 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 LRFN1Q9P244 771 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 GOLT1BQ9Y3E0 138 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 A0A087X0M5 115 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 A0A1B0GX30 115 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF716A6NP11 495 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 SERPINA7P05543 415 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 ACKR3P25106 362 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 CD34P28906 385 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 DDTP30046 118 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF133P52736 654 aaPredicted RBP10.54□□□□□ -0.72
COL27A1-202ENST00000451716 RIPPLY1Q0D2K3 151 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 ALKAL2Q6UX46 152 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 FOXL2NBQ6ZUU3 175 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 TMUB2Q71RG4 321 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 LDLRAD3Q86YD5 345 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 MARCH1Q8TCQ1 289 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 SSC4DQ8WTU2 575 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 SIGLEC12Q96PQ1 595 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 TAAR9Q96RI9 348 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 ST6GALNAC5Q9BVH7 336 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 GPR173Q9NS66 373 aa10.54□□□□□ -0.72
COL27A1-202ENST00000451716 MEX3AA1L020 520 aaKnown RBP10.53□□□□□ -0.72
COL27A1-202ENST00000451716 GPR31O00270 319 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 IGLV3-1P01715 115 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF25P17030 456 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-202ENST00000451716 PI3P19957 117 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 AVPR2P30518 371 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 OTX1P32242 354 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-202ENST00000451716 HIST1H3AP68431 136 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 ARFRP1Q13795 201 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 HLXQ14774 488 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-202ENST00000451716 HIST2H3PS2Q5TEC6 136 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 FAM27BQ5VT28 67 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 HIST2H3AQ71DI3 136 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 GFOD1Q9NXC2 390 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 PLA2G3Q9NZ20 509 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 FBLN5Q9UBX5 448 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 PLEKHA6Q9Y2H5 1048 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 CHRM2P08172 466 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 MGMTP16455 207 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF32P17041 273 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 S100A11P31949 105 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 DLSTP36957 453 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 MRPS34P82930 218 aaKnown RBP10.53□□□□□ -0.72
COL27A1-202ENST00000451716 FOXO1Q12778 655 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 C9orf135Q5VTT2 229 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 CDPF1Q6NVV7 123 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 H3F3CQ6NXT2 135 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 KCTD9Q7L273 389 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 OR2W3Q7Z3T1 314 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 NAXDQ8IW45 347 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 PNLDC1Q8NA58 520 aaKnown RBP10.53□□□□□ -0.72
COL27A1-202ENST00000451716 OR2V1Q8NHB1 315 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 SPTSSAQ969W0 71 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 TMPRSS13Q9BYE2 586 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF107Q9UII5 783 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-202ENST00000451716 R4GN57 208 aa10.53□□□□□ -0.72
COL27A1-202ENST00000451716 TRAV14DV4A0A0A6YYC5 116 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 A0A0U1RQV5 110 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 M0R296 226 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-202ENST00000451716 ANGPTL7O43827 346 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 BLVRBP30043 206 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-202ENST00000451716 NPY4RP50391 375 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 IL13RA1P78552 427 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 ATXN7L3Q14CW9 347 aaPredicted RBP10.52□□□□□ -0.72
COL27A1-202ENST00000451716 CEACAM16Q2WEN9 425 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 CDCP2Q5VXM1 449 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 LINC00696Q6ZRV3 163 aa10.52□□□□□ -0.72
COL27A1-202ENST00000451716 GPR137CQ8N3F9 429 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms