RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZNF43P17038 809 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 ATP6V0CP27449 155 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 GRK6P43250 576 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 EMP2P54851 167 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 FAM3BP58499 235 aaPredicted RBP7.58□□□□□ -1.2
LSM5-208ENST00000450169 RANP62826 216 aaKnown RBP7.58□□□□□ -1.2
LSM5-208ENST00000450169 BTN3A2P78410 334 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 ZFP36L1Q07352 338 aaKnown RBP7.58□□□□□ -1.2
LSM5-208ENST00000450169 ZNF266Q14584 549 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 ATP6V1FQ16864 119 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 SP5Q6BEB4 398 aaPredicted RBP7.58□□□□□ -1.2
LSM5-208ENST00000450169 CATSPERDQ86XM0 798 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 CACUL1Q86Y37 369 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 NRSN1Q8IZ57 195 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 MAML2Q8IZL2 1156 aaPredicted RBP7.58□□□□□ -1.2
LSM5-208ENST00000450169 METTL27Q8N6F8 245 aaPredicted RBP7.58□□□□□ -1.2
LSM5-208ENST00000450169 MFSD9Q8NBP5 474 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 AGBL5Q8NDL9 886 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 NUDT10Q8NFP7 164 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 OR1L6Q8NGR2 347 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 TMEM37Q8WXS4 190 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 CCDC74BQ96LY2 380 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 PARD6GQ9BYG4 376 aaPredicted RBP7.58□□□□□ -1.2
LSM5-208ENST00000450169 GPR84Q9NQS5 396 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 RNF186Q9NXI6 227 aa7.58□□□□□ -1.2
LSM5-208ENST00000450169 CACNA1CQ13936 2221 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 LOC107986453A0A1B0GWG9 222 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 HSBP1L1C9JCN9 74 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 RENP00797 406 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 MMP9P14780 707 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 GABRA3P34903 492 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 ASCL1P50553 236 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 RAB38P57729 211 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 ACOT6Q3I5F7 207 aaPredicted RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 COX15Q7KZN9 410 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 SPRED2Q7Z698 418 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 CMTM8Q8IZV2 173 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 GCNT2Q8N0V5 402 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 C10orf53Q8N6V4 93 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 ORAOV1Q8WV07 137 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 ZCCHC14Q8WYQ9 949 aaKnown RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 MS4A10Q96PG2 267 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 ALKBH7Q9BT30 221 aaPredicted RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 SDF2L1Q9HCN8 221 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 MRPL22Q9NWU5 206 aaKnown RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 EHFQ9NZC4 300 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 LSM7Q9UK45 103 aaKnown RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 GPR34Q9UPC5 381 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 FUT9Q9Y231 359 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 MRPS2Q9Y399 296 aaKnown RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 LOC102723971A0A1B0GUV8 181 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 CBY3A6NI87 242 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 SOX1O00570 391 aaPredicted RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 SCDO00767 359 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 LMX1BO60663 402 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 EOMESO95936 686 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 PFN1P07737 140 aaKnown RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 ZNF888P0CJ79 500 aaPredicted RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 HIST1H1DP16402 221 aaKnown RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 GALNSP34059 522 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 GPR1P46091 355 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 ROM1Q03395 351 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 IL13RA2Q14627 380 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 TMEM183BQ1AE95 376 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 PLAC9Q5JTB6 97 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 ACTL10Q5JWF8 245 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 FHL5Q5TD97 284 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 SLC18B1Q6NT16 456 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 TOMM20LQ6UXN7 152 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 AMZ2Q86W34 360 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 LYG1Q8N1E2 194 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 SLC22A24Q8N4F4 322 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 LRRC75AQ8NAA5 344 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 OR2A1Q8NGT9 310 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 LMLNQ96KR4 655 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 TECTBQ96PL2 329 aa7.57□□□□□ -1.2
LSM5-208ENST00000450169 APOBEC3BQ9UH17 382 aaKnown RBP7.57□□□□□ -1.2
LSM5-208ENST00000450169 GRXCR1A8MXD5 290 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 AQP7O14520 342 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 HBE1P02100 147 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 TMEM225BP0DP42 221 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 CPMP14384 443 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 UCP3P55916 312 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 TAS2R46P59540 309 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 ERVS71-1P61550 626 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 DCAF7P61962 342 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 CDK3Q00526 305 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 EWSR1Q01844 656 aaKnown RBP eCLIP7.56□□□□□ -1.2
LSM5-208ENST00000450169 IL24Q13007 206 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 ENDOGQ14249 297 aaKnown RBP7.56□□□□□ -1.2
LSM5-208ENST00000450169 RTL6Q6ICC9 239 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 OR8G2PQ6IF36 304 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 SLC25A24Q6NUK1 477 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 KCTD18Q6PI47 426 aaPredicted RBP7.56□□□□□ -1.2
LSM5-208ENST00000450169 GRINAQ7Z429 371 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 TMEM123Q8N131 208 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 RAB42Q8N4Z0 105 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 NECAP1Q8NC96 275 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 PTPMT1Q8WUK0 201 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms