RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 LINC00862A6NCI5 91 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 RBFOX3A6NFN3 312 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 M0R1B8 84 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 OGG1O15527 345 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 CHRNA7P36544 502 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 LPAR6P43657 344 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 CDC34P49427 236 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TIAL1Q01085 375 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■■□□□ 12.6
NEDD9-204ENST00000448183 IL24Q13007 206 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 PDCD1Q15116 288 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 VMA21Q3ZAQ7 101 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF770Q6IQ21 691 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 OR5M9Q8NGP3 310 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM56Q96MV1 263 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 MIXL1Q9H2W2 232 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 SLC2A8Q9NY64 477 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TAAR3PQ9P1P4 343 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 MYO5AQ9Y4I1 1855 aaKnown RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ITGB4P16144 1822 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ALG1L2C9J202 215 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 GPR3P46089 330 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 IGFBP7Q16270 282 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 Q1RN00 199 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 PRICKLE4Q2TBC4 344 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 BSXQ3C1V8 233 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TMEM240Q5SV17 173 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 SPATA46Q5T0L3 261 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 RGS7BPQ6MZT1 257 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 LIAT1Q6ZQX7 453 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 UBALD1Q8TB05 177 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TAAR9Q96RI9 348 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TMPRSS13Q9BYE2 586 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 Q9N2K0 584 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 NTMQ9P121 344 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TCRBV16S1A1N1A0A5B0 115 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 PLA2G10O15496 165 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 CTSVO60911 334 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 CTSDP07339 412 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 CEACAM6P40199 344 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 RFC3P40938 356 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 AMTP48728 403 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 GNG4P50150 75 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ATP6V1FQ16864 119 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 GVQW1Q8N7I0 195 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 SEC11CQ9BY50 192 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 VN1R1Q9GZP7 353 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ZMIZ1Q9ULJ6 1067 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 TRAV34A0A0B4J273 112 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 MED19A0JLT2 244 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 SHISA8B8ZZ34 492 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 M0R143 59 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 OR2J3O76001 311 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 CXCL10P02778 98 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 CTLA4P16410 223 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 OR3A4PP47883 348 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 RHOBP62745 196 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF141Q15928 474 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 STUMQ69YW2 141 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ACSM6Q6P461 480 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 WDR73Q6P4I2 378 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 BTNL3Q6UXE8 466 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ETV3LQ6ZN32 361 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 BHLHA9Q7RTU4 235 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 NUFIP2Q7Z417 695 aaKnown RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 LINC01555Q8NAE3 123 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 OR10AD1Q8NGE0 317 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 OR2T10Q8NGZ9 312 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 PHF7Q9BWX1 381 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 AAMDCQ9H7C9 122 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 SLC25A22Q9H936 323 aa6.93□□□□□ -1.3
NEDD9-204ENST00000448183 MRM2Q9UI43 246 aaKnown RBP6.93□□□□□ -1.3
NEDD9-204ENST00000448183 ARAP2Q8WZ64 1704 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 PAPPAQ13219 1627 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 LAMB1P07942 1786 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 LRRC3CA6NJW4 275 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 BMPR1BO00238 502 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 GATCO43716 136 aaKnown RBP6.92□□□□□ -1.3
NEDD9-204ENST00000448183 SPINK4O60575 86 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 ARG1P05089 322 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 NHLH1Q02575 133 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 NHLH2Q02577 135 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 CBLN2Q8IUK8 224 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 OR10V1Q8NGI7 309 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 OR10G4Q8NGN3 311 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 OR10G9Q8NGN4 311 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 OR10G7Q8NGN6 311 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 IL22RA2Q969J5 263 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 MOB3AQ96BX8 217 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 ZNF764Q96H86 408 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-204ENST00000448183 OR2A5Q96R48 311 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 ADAT1Q9BUB4 502 aaKnown RBP6.92□□□□□ -1.3
NEDD9-204ENST00000448183 BET1LQ9NYM9 111 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 NRAPQ86VF7 1730 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 THSD7AQ9UPZ6 1657 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 HYAL3O43820 417 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-204ENST00000448183 TTRP02766 147 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 HPXP02790 462 aa6.92□□□□□ -1.3
NEDD9-204ENST00000448183 S100A4P26447 101 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms