RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 STT3BQ8TCJ2 826 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 NIPSNAP3BQ9BS92 247 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 ZNF581Q9P0T4 197 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 FOXD3Q9UJU5 478 aaPredicted RBP12.24□□□□□ -0.45
VPS52-212ENST00000445902 CYP8B1Q9UNU6 501 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 TMED3Q9Y3Q3 217 aa12.24□□□□□ -0.45
VPS52-212ENST00000445902 C2orf16Q68DN1 1984 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 ZNF705GA8MUZ8 300 aaPredicted RBP12.23□□□□□ -0.45
VPS52-212ENST00000445902 NPIPB7O75200 414 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 ONECUT2O95948 504 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 HNRNPA1P09651 372 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS52-212ENST00000445902 ZNF17P17021 662 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 BIDP55957 195 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 ABCA11PQ4W5N1 156 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 HIST2H3PS2Q5TEC6 136 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 MEX3BQ6ZN04 569 aaKnown RBP12.23□□□□□ -0.45
VPS52-212ENST00000445902 FAM57BQ71RH2 274 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 TVP23CQ96ET8 276 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 FAM210BQ96KR6 192 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 WSB1Q9Y6I7 421 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 PCDH15Q96QU1 1955 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 ELOA3CA0A087WX78 387 aaPredicted RBP12.23□□□□□ -0.45
VPS52-212ENST00000445902 EREGO14944 169 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 APODP05090 189 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 HSD11B2P80365 405 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 RUNX1Q01196 453 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 DEGS2Q6QHC5 323 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 NUP54Q7Z3B4 507 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 DYRK2Q92630 601 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 NEU1Q99519 415 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 C2orf88Q9BSF0 95 aa12.23□□□□□ -0.45
VPS52-212ENST00000445902 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 FAM221AA4D161 298 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 H3BML4 177 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 TNFSF12O43508 249 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 NXPH3O95157 252 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 IFNA10P01566 189 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 CTSDP07339 412 aaPredicted RBP12.22□□□□□ -0.45
VPS52-212ENST00000445902 FUT3P21217 361 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 PLCXD2Q0VAA5 305 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 ICAM4Q14773 271 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 CARD17Q5XLA6 110 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 OR11L1Q8NGX0 322 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 RTN4IP1Q8WWV3 396 aaPredicted RBP12.22□□□□□ -0.45
VPS52-212ENST00000445902 RBM14Q96PK6 669 aaKnown RBP12.22□□□□□ -0.45
VPS52-212ENST00000445902 DUSP15Q9H1R2 295 aaPredicted RBP12.22□□□□□ -0.45
VPS52-212ENST00000445902 UCK1Q9HA47 277 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 SLC7A11Q9UPY5 501 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 KIAA2026Q5HYC2 2103 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 ZNF850A8MQ14 1090 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 E9PLN8 166 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 RER1O15258 196 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 SOX15O60248 233 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 DBHP09172 617 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 GLIPR1P48060 266 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 EWSR1Q01844 656 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS52-212ENST00000445902 TLE3Q04726 772 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 KISS1Q15726 138 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 NKAIN1Q4KMZ8 207 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 ZNF880Q6PDB4 577 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 TMEM123Q8N131 208 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 ZNF664Q8N3J9 261 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 SPPL3Q8TCT6 385 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.22□□□□□ -0.45
VPS52-212ENST00000445902 MAGT1Q9H0U3 335 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 HSF4Q9ULV5 492 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 VDAC3Q9Y277 283 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 ARHGAP21Q5T5U3 1957 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 THADAQ6YHU6 1953 aa12.22□□□□□ -0.45
VPS52-212ENST00000445902 OR1D4P47884 311 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 HSF1Q00613 529 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 MFAP5Q13361 173 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 FZD2Q14332 565 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 C16orf47Q6ZP98 133 aaPredicted RBP12.21□□□□□ -0.45
VPS52-212ENST00000445902 TMEM217Q8N7C4 229 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 PIGTQ969N2 578 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 PLA2G2FQ9BZM2 168 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 PLEKHJ1Q9NW61 149 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 DCAF16Q9NXF7 216 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 LHFPL6Q9Y693 200 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 CHD3Q12873 2000 aaKnown RBP12.21□□□□□ -0.45
VPS52-212ENST00000445902 FTCDNL1E5RQL4 147 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 MSTNO14793 375 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 ST8SIA3O43173 380 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 IGHMP01871 453 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 COL9A1P20849 921 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 CSNK1A1P48729 337 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 TMEM187Q14656 261 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 HAS2Q92819 552 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 TMEM68Q96MH6 324 aa12.21□□□□□ -0.45
VPS52-212ENST00000445902 A6NIZ1 184 aa12.21□□□□□ -0.46
VPS52-212ENST00000445902 A8MWP6 167 aa12.21□□□□□ -0.46
VPS52-212ENST00000445902 C9J4A7 227 aa12.21□□□□□ -0.46
VPS52-212ENST00000445902 NR2C1P13056 603 aa12.21□□□□□ -0.46
VPS52-212ENST00000445902 HSD17B7P56937 341 aa12.21□□□□□ -0.46
VPS52-212ENST00000445902 RAP1BP61224 184 aa12.21□□□□□ -0.46
VPS52-212ENST00000445902 GPR157Q5UAW9 335 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms