RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 RPL36Q9Y3U8 105 aaKnown RBP12.14□□□□□ -0.47
USE1-202ENST00000445667 A0A1W2PQ09 198 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 OR4C45A6NMZ5 311 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 F8VVB4 439 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 F8VWA3 439 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 HAX1O00165 279 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 HOXA3O43365 443 aaPredicted RBP12.13□□□□□ -0.47
USE1-202ENST00000445667 WBP4O75554 376 aaKnown RBP12.13□□□□□ -0.47
USE1-202ENST00000445667 IGHA1P01876 353 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 ISG15P05161 165 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 CCR9P51686 369 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 ERVK11-1P61568 191 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 ACTA2P62736 377 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 ACTG2P63267 376 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 RAB40BQ12829 278 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 IL24Q13007 206 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 RCN1Q15293 331 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 CMTM4Q8IZR5 234 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 OR51A4Q8NGJ6 313 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 SLAMF9Q96A28 289 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 BORCS8Q96FH0 119 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
USE1-202ENST00000445667 RDH12Q96NR8 316 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 PRDM13Q9H4Q3 707 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
USE1-202ENST00000445667 MRPS18AQ9NVS2 196 aaKnown RBP12.13□□□□□ -0.47
USE1-202ENST00000445667 IGKV1-9A0A0C4DH69 117 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 A0A1W2PRD5 423 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 A0A1W2PRF3 423 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 A0A1W2PRM7 423 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 E9PI62 339 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 RNASE1P07998 156 aaKnown RBP12.12□□□□□ -0.47
USE1-202ENST00000445667 ZNF20P17024 532 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 CFPP27918 469 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 PEX2P28328 305 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
USE1-202ENST00000445667 KLRD1Q13241 179 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 KLHL22Q53GT1 634 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 Q6YL49 198 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 SLC25A26Q70HW3 274 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 FAM185AQ8N0U4 392 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 SYS1Q8N2H4 156 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 KIR3DL3Q8N743 410 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 ZNF676Q8N7Q3 588 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 CNIH3Q8TBE1 160 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 PP6455Q8WZ26 134 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 SLC25A28Q96A46 364 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 DMRTB1Q96MA1 342 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 ZMAT3Q9HA38 289 aaKnown RBP12.12□□□□□ -0.47
USE1-202ENST00000445667 HHLA2Q9UM44 414 aa12.12□□□□□ -0.47
USE1-202ENST00000445667 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 RNASEK-C17orf49H0YIS7 233 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 CLDN34H7C241 214 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 SLC1A7O00341 560 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 HKR1P10072 659 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 ATF1P18846 271 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 RBP2P50120 134 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 ATP1B3P54709 279 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 CNN3Q15417 329 aaKnown RBP12.11□□□□□ -0.47
USE1-202ENST00000445667 AWAT1Q58HT5 328 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 ZNF561Q8N587 486 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 OR4M1Q8NGD0 313 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 OR13C3Q8NGS6 347 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 CEP19Q96LK0 163 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 NOX4Q9NPH5 578 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 INPP5EQ9NRR6 644 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
USE1-202ENST00000445667 SPRY1O43609 319 aaPredicted RBP12.1□□□□□ -0.47
USE1-202ENST00000445667 KNG1P01042 644 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 MELTFP08582 738 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 CALCBP10092 127 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 AZGP1P25311 298 aaKnown RBP12.1□□□□□ -0.47
USE1-202ENST00000445667 POU3F4P49335 361 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
USE1-202ENST00000445667 MTCP1P56278 107 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 ADARB1P78563 741 aaKnown RBP12.1□□□□□ -0.47
USE1-202ENST00000445667 COL10A1Q03692 680 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 TTC23Q5W5X9 447 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 C16orf87Q6PH81 154 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 UTS2BQ765I0 119 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 EGFL6Q8IUX8 553 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 PNKDQ8N490 385 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 DHRSXQ8N5I4 330 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 C3orf56Q8N813 242 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 DNAAF1Q8NEP3 725 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 TNFRSF14Q92956 283 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 RFT1Q96AA3 541 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
USE1-202ENST00000445667 PDCD1LG2Q9BQ51 273 aa12.1□□□□□ -0.47
USE1-202ENST00000445667 FGF20Q9NP95 211 aaPredicted RBP12.1□□□□□ -0.47
USE1-202ENST00000445667 TRBV23-1A0A0A0MS06 115 aa12.09□□□□□ -0.47
USE1-202ENST00000445667 H0YAE9 185 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms