RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 STUMQ69YW2 141 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 ZNF841Q6ZN19 808 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 ACP7Q6ZNF0 438 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 TMEM91Q6ZNR0 172 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 DCDC5Q6ZRR9 648 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 LHFPL2Q6ZUX7 228 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 FGFRL1Q8N441 504 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 SVOPQ8N4V2 548 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 LINC01356Q8N9X3 169 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 OR5D18Q8NGL1 313 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 RAB39BQ96DA2 213 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 HES4Q9HCC6 221 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 NOX4Q9NPH5 578 aa13.36□□□□□ -0.27
USP39-205ENST00000442708 IGKV1D-17A0A075B6S4 117 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 B4DSR2 109 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 PHF1O43189 567 aaPredicted RBP13.35□□□□□ -0.27
USP39-205ENST00000442708 ANGPTL7O43827 346 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 GPX5O75715 221 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 MSMBP08118 114 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 HCKP08631 526 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 ACAA1P09110 424 aaPredicted RBP13.35□□□□□ -0.27
USP39-205ENST00000442708 RPS2P15880 293 aaKnown RBP13.35□□□□□ -0.27
USP39-205ENST00000442708 FSTP19883 344 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 GLRA1P23415 457 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 TGFBR2P37173 567 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 NPBWR2P48146 333 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 ZP1P60852 638 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 LCN2P80188 198 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 PDZK1IP1Q13113 114 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 KISS1Q15726 138 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 MICBQ29980 383 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 MS4A15Q8N5U1 240 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 NEIL1Q96FI4 390 aaPredicted RBP13.35□□□□□ -0.27
USP39-205ENST00000442708 CCL13Q99616 98 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 SMURF1Q9HCE7 757 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 YAE1D1Q9NRH1 226 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 NLKQ9UBE8 527 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 DNAJB11Q9UBS4 358 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 MIOXQ9UGB7 285 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 LRCH1Q9Y2L9 728 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 POLDIP2Q9Y2S7 368 aa13.35□□□□□ -0.27
USP39-205ENST00000442708 OR2AT4A6NND4 320 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 ADAM20O43506 726 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 OCMP0CE72 109 aaPredicted RBP13.34□□□□□ -0.27
USP39-205ENST00000442708 CALCBP10092 127 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 PSG2P11465 335 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 SELLP14151 372 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 BCL3P20749 454 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 FABP5Q01469 135 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 C1QL2Q7Z5L3 287 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 FAM216BQ8N7L0 139 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 ANGPTL6Q8NI99 470 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 TMIGD2Q96BF3 282 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 CEP19Q96LK0 163 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 TMEM138Q9NPI0 162 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 RASL12Q9NYN1 266 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 IL36RNQ9UBH0 155 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 ZNF222Q9UK12 451 aa13.34□□□□□ -0.27
USP39-205ENST00000442708 SONP18583 2426 aaKnown RBP13.34□□□□□ -0.27
USP39-205ENST00000442708 NIPBLQ6KC79 2804 aaeCLIP13.33□□□□□ -0.28
USP39-205ENST00000442708 TRAPPC2LH3BP13 241 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 GABRPO00591 440 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 NXPH2O95156 264 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 ALDOBP05062 364 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 BDKRB2P30411 391 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 PITPNBP48739 271 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 CEBPDP49716 269 aaPredicted RBP13.33□□□□□ -0.28
USP39-205ENST00000442708 ATPAF1Q5TC12 328 aaPredicted RBP13.33□□□□□ -0.28
USP39-205ENST00000442708 CEACAM19Q7Z692 300 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 SATL1Q86VE3 508 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 CD177Q8N6Q3 437 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 OR8B3Q8NGG8 313 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 C12orf43Q96C57 262 aaKnown RBP13.33□□□□□ -0.28
USP39-205ENST00000442708 GAFA1Q96PS6 74 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 OR8B2Q96RD0 313 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 RBFOX1Q9NWB1 397 aaKnown RBP13.33□□□□□ -0.28
USP39-205ENST00000442708 KAAG1Q9UBP8 84 aa13.33□□□□□ -0.28
USP39-205ENST00000442708 FN1P02751 2386 aaKnown RBP13.32□□□□□ -0.28
USP39-205ENST00000442708 RFPL4AA6NLU0 287 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 A8MXK9 166 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 RFPL4AL1F8VTS6 287 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 TMPRSS2O15393 492 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 NDUFA2O43678 99 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 TNFAIP8O95379 198 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 MAS1P04201 325 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 UCHL1P09936 223 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 TMEM225BP0DP42 221 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 ADRA2CP18825 462 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 MAPK3P27361 379 aaPredicted RBP13.32□□□□□ -0.28
USP39-205ENST00000442708 PSMB9P28065 219 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 GABRA5P31644 462 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 OR3A4PP47883 348 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 DVL1P1P54792 670 aaPredicted RBP13.32□□□□□ -0.28
USP39-205ENST00000442708 PPP3R1P63098 170 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 PAX2Q02962 417 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 KCNJ8Q15842 424 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 ESCO2Q56NI9 601 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 DDI2Q5TDH0 399 aa13.32□□□□□ -0.28
USP39-205ENST00000442708 WDR25Q64LD2 544 aaPredicted RBP13.32□□□□□ -0.28
USP39-205ENST00000442708 FAM166AQ6J272 317 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms