RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 PEF1Q9UBV8 284 aaKnown RBP1.94□□□□□ -2.1
VPS41-207ENST00000439468 RGPD2P0DJD1 1756 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 WDFY3Q8IZQ1 3526 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 VPS13AQ96RL7 3174 aa1.94□□□□□ -2.1
VPS41-207ENST00000439468 FAM208AQ9UK61 1670 aaKnown RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 ANKARQ7Z5J8 1434 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 MYO18BQ8IUG5 2567 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 A0A0A6YYD5 115 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 IGHV7-4-1A0A0J9YVY3 117 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 SLC22A20A6NK97 555 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 LGALS9O00182 355 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 EIF1BO60739 113 aaKnown RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 CTNSO60931 367 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 HSBP1O75506 76 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 RCBTB2O95199 551 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 IGLV2-8P01709 118 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 TRBV12-3P01733 135 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 CD74P04233 296 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 TACSTD2P09758 323 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ZNF14P17017 642 aaPredicted RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 MYL9P24844 172 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 EIF1P41567 113 aaKnown RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 PSMD4P55036 377 aaKnown RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 AP1S2P56377 157 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 DAOAP59103 153 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ZNF616Q08AN1 781 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 SLC25A35Q3KQZ1 300 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 TEX30Q5JUR7 227 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 TMEM31Q5JXX7 168 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 MLIPQ5VWP3 458 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 TMEM236Q5W0B7 351 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 RTL4Q6ZR62 310 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 HMGN2P46Q86SG4 172 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 MDP1Q86V88 176 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 WDR31Q8NA23 367 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 OR5T1Q8NG75 326 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 OR4M1Q8NGD0 313 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 OR13G1Q8NGZ3 307 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ASZ1Q8WWH4 475 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 RXFP2Q8WXD0 754 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 BAALCQ8WXS3 180 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 CPNE4Q96A23 557 aaPredicted RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 RMI2Q96E14 147 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 KCNS1Q96KK3 526 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 LINC00477Q96M19 166 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 GPR21Q99679 349 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 TBL1YQ9BQ87 522 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 RTBDNQ9BSG5 229 aaPredicted RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 SCRT1Q9BWW7 348 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 CHRNA10Q9GZZ6 450 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 RGCCQ9H4X1 137 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 REEP1Q9H902 201 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 DYRK4Q9NR20 520 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 C21orf62Q9NYP8 219 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ADA2Q9NZK5 511 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ENOPH1Q9UHY7 261 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ZNF257Q9Y2Q1 563 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 SIGLEC9Q9Y336 463 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 KPTNQ9Y664 436 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 COL1A1P02452 1464 aaPredicted RBP1.93□□□□□ -2.1
VPS41-207ENST00000439468 MRC1P22897 1456 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 FRYQ5TBA9 3013 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ZNF831Q5JPB2 1677 aa1.93□□□□□ -2.1
VPS41-207ENST00000439468 ZZEF1O43149 2961 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 ZFYVE26Q68DK2 2539 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 ZNF609O15014 1411 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 FBN3Q75N90 2809 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 A0A0G2JMZ2 1700 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 LOC400499M0QZD8 3231 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 IGLV2-18A0A075B6J9 118 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 TRAV40A0A0B4J280 105 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 A8MUU9 505 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 H3BN98 237 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 M0R1X1 148 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 POLR1CO15160 346 aaPredicted RBP1.92□□□□□ -2.1
VPS41-207ENST00000439468 RRP8O43159 456 aaKnown RBP1.92□□□□□ -2.1
VPS41-207ENST00000439468 RAD1O60671 282 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 RBBP9O75884 186 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 IGHV3-11P01762 117 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 MT-ND4P03905 459 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 DMC1Q14565 340 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 OR1Q1Q15612 314 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 C6orf99Q4VX62 202 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 RWDD4Q6NW29 188 aaKnown RBP1.92□□□□□ -2.1
VPS41-207ENST00000439468 IGFL1Q6UW32 110 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 DRAM1Q8N682 238 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 UBAC2Q8NBM4 344 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 FBXO36Q8NEA4 188 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 C19orf18Q8NEA5 215 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 C17orf50Q8WW18 174 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 TFGQ92734 400 aaPredicted RBP1.92□□□□□ -2.1
VPS41-207ENST00000439468 CDS1Q92903 461 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 TOP1MTQ969P6 601 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 TMEM159Q96B96 161 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 NUDT9Q9BW91 350 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 CHID1Q9BWS9 393 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 OSBPL11Q9BXB4 747 aa1.92□□□□□ -2.1
VPS41-207ENST00000439468 EXOSC4Q9NPD3 245 aaKnown RBP1.92□□□□□ -2.1
VPS41-207ENST00000439468 WIF1Q9Y5W5 379 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms