RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SPNS3Q6ZMD2 512 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 SUMF2Q8NBJ7 301 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 CSNK2A3Q8NEV1 391 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 SLC26A10Q8NG04 563 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 RELTQ969Z4 430 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 ARHGAP5-AS1Q96IT6 56 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 GINS3Q9BRX5 216 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 WFDC1Q9HC57 220 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 EHFQ9NZC4 300 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 PRODH2Q9UF12 536 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 TUBD1Q9UJT1 453 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 C14orf166Q9Y224 244 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 MRPS28Q9Y2Q9 187 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 STRAPQ9Y3F4 350 aaKnown RBP7.52□□□□□ -1.21
HPS4-206ENST00000439453 CLDN16Q9Y5I7 305 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 IGF2RP11717 2491 aa7.52□□□□□ -1.21
HPS4-206ENST00000439453 CDC14BO60729 498 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 WISP1O95388 367 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 SCGB1D2O95969 90 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 MT-ATP6P00846 226 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 CLPSP04118 112 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 TAS2R60P59551 318 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 ZNF117Q03924 483 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 RSU1Q15404 277 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 SEMA6DQ8NFY4 1073 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 RTN4RQ9BZR6 473 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 OR11A1Q9GZK7 315 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 CPAMD8Q8IZJ3 1885 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 PCSK5Q92824 1860 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 A0A1B0GV50 99 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 ZNF727A8MUV8 499 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 CDRT15L2A8MXV6 281 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 HCRTR2O43614 444 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 DXOO77932 396 aaKnown RBP7.51□□□□□ -1.21
HPS4-206ENST00000439453 F10P00742 488 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 SLC6A8P48029 635 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 MMP16P51512 607 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 ZNF84P51523 738 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 SLC26A5P58743 744 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 FOXK1P85037 733 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 GAMTQ14353 236 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 DEGS2Q6QHC5 323 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 KCNG3Q8TAE7 436 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 NTNG2Q96CW9 530 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 TGIF2Q9GZN2 237 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 HRASLS2Q9NWW9 162 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 FAM206AQ9NX38 181 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 DKK4Q9UBT3 224 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 TMED3Q9Y3Q3 217 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 C17orf51A8MQB3 221 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 RAMP1O60894 148 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 IFNA21P01568 189 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 SLC2A1P11166 492 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 BTF3P20290 206 aaKnown RBP7.51□□□□□ -1.21
HPS4-206ENST00000439453 DDTP30046 118 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 TAS2R46P59540 309 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 GGNBP1Q5YKI7 109 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 COMMD2Q86X83 199 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 ARHGEF39Q8N4T4 335 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 TMEM156Q8N614 296 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 MFSD8Q8NHS3 518 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 TCTN2Q96GX1 697 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 LURAP1Q96LR2 239 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 C1orf147Q96MC9 270 aaPredicted RBP7.51□□□□□ -1.21
HPS4-206ENST00000439453 TMEM59Q9BXS4 323 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 FAM60AQ9NP50 221 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 ZDHHC8Q9ULC8 765 aa7.51□□□□□ -1.21
HPS4-206ENST00000439453 A0A1B0GW64 132 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 A0A1W2PP11 408 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 CLDN4O14493 209 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 PLPP3O14495 311 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 NUDT14O95848 222 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 IGHMP01871 453 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 PPP1CCP36873 323 aaKnown RBP7.5□□□□□ -1.21
HPS4-206ENST00000439453 OR3A4PP47883 348 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 P2RY1P47900 373 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 GABRA4P48169 554 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 SNU13P55769 128 aaKnown RBP7.5□□□□□ -1.21
HPS4-206ENST00000439453 PKIAP61925 76 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 FMODQ06828 376 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 SURF2Q15527 256 aaPredicted RBP7.5□□□□□ -1.21
HPS4-206ENST00000439453 DNLZQ5SXM8 178 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 UNQ6494/PRO21346Q6UXR6 183 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 LRRC18Q8N456 261 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 MRPL24Q96A35 216 aaKnown RBP7.5□□□□□ -1.21
HPS4-206ENST00000439453 RARRES2Q99969 163 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 PBOV1Q9GZY1 135 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 SH3BGRL3Q9H299 93 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 BCO1Q9HAY6 547 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 RPL36A-HNRNPH2H7BZ11 118 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 TLX3O43711 291 aaPredicted RBP7.5□□□□□ -1.21
HPS4-206ENST00000439453 HIST1H2BKO60814 126 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 IFNA10P01566 189 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 HIST1H2BJP06899 126 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 CXCL1P09341 107 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 ZNF20P17024 532 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 HIST1H2BOP23527 126 aa7.5□□□□□ -1.21
HPS4-206ENST00000439453 HIST1H2BBP33778 126 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms