RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	HTR5A	P47898	357 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	RPS18	P62269	152 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FAM3A	P98173	230 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SPEM2	Q0P670	501 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OR8B8	Q15620	311 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TRIM61	Q5EBN2	209 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CTRB2	Q6GPI1	263 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SULT4A1	Q9BR01	284 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	NKX6-2	Q9C056	277 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GPR35	Q9HC97	309 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	MMP26	Q9NRE1	261 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	LPAR3	Q9UBY5	353 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FAM74A7	A6NL05	159 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ABCD4	O14678	606 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CYTIP	O60759	359 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PATE4	P0C8F1	98 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OTX2	P32243	289 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GFRA1	P56159	465 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PCBD1	P61457	104 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	IAH1	Q2TAA2	248 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CEACAM16	Q2WEN9	425 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FAM74A3	Q4VXF1	159 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ACER2	Q5QJU3	275 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SLC23A3	Q6PIS1	610 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	IL34	Q6ZMJ4	242 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	BOLL	Q8N9W6	283 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OR4A4P	Q8NGN8	299 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SAT2	Q96F10	170 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	BORCS8	Q96FH0	119 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CMSS1	Q9BQ75	279 aa	Known RBP	13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	NECAP2	Q9NVZ3	263 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GSKIP	Q9P0R6	139 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	NCKAP5	O14513	1909 aa		13.95	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PCSK5	Q92824	1860 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SFTPB	P07988	381 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	MMP7	P09237	267 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ADCYAP1	P18509	176 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	EIF5A	P63241	154 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FAM122C	Q6P4D5	195 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ESX1	Q8N693	406 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FNDC9	Q8TBE3	224 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SPSB4	Q96A44	273 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TMEM45B	Q96B21	275 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	NARS2	Q96I59	477 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SMIM8	Q96KF7	97 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ACKR4	Q9NPB9	350 aa		13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.94	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	LAMTOR5	O43504	91 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SERPINA7	P05543	415 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ACP1	P24666	158 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FUT6	P51993	359 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	RRAD	P55042	308 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	S100A10	P60903	97 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF92	Q03936	586 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FOXO1	Q12778	655 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PDZK1IP1	Q13113	114 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	NRN1L	Q496H8	165 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CCDC157	Q569K6	752 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PABPC1L2A	Q5JQF8	200 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PDSS1	Q5T2R2	415 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	DCAF12	Q5T6F0	453 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FAM219A	Q8IW50	185 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SKA3	Q8IX90	412 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OR10AD1	Q8NGE0	317 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CT55	Q8WUE5	264 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GALNT14	Q96FL9	552 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TECTB	Q96PL2	329 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	BCO1	Q9HAY6	547 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	DEDD	O75618	318 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PMEL	P40967	661 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ARHGDIB	P52566	201 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PRSS12	P56730	875 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SSPN	Q14714	243 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TMEM268	Q5VZI3	342 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GGNBP1	Q5YKI7	109 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TIPARP	Q7Z3E1	657 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TMEM200A	Q86VY9	491 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OSR2	Q8N2R0	312 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	LRTM2	Q8N967	370 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CLRN3	Q8NCR9	226 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SLC39A7	Q92504	469 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PSMF1	Q92530	271 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CPNE4	Q96A23	557 aa	Predicted RBP	13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	MRPL24	Q96A35	216 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	POM121	Q96HA1	1249 aa		13.93	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PINLYP	A6NC86	204 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GEMIN2	O14893	280 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PLAT	P00750	562 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GAPDH	P04406	335 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OPRM1	P35372	400 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SRSF3	P84103	164 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PJVK	Q0ZLH3	352 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TMEM187	Q14656	261 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF169	Q14929	603 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	DAZAP2	Q15038	168 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PIGY	Q3MUY2	71 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	RPL7L1	Q6DKI1	246 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	COLCA1	Q6ZS62	124 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PUSL1	Q8N0Z8	303 aa	Known RBP	13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms