RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 FAM189A2Q15884 450 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 BEX5Q5H9J7 111 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 SHEQ5VZ18 495 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 ASCL4Q6XD76 172 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 LRP11Q86VZ4 500 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 CALHM1Q8IU99 346 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 SNX29P2Q8IUI4 249 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 OR8H2Q8N162 312 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 OR10K1Q8NGX5 313 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 OR13G1Q8NGZ3 307 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 C15orf40Q8WUR7 153 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 MRPL24Q96A35 216 aaKnown RBP9.59□□□□□ -0.87
LINC00539-203ENST00000434601 PLPPR2Q96GM1 343 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 C18orf12Q96KH6 178 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 ABHD1Q96SE0 405 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 GAL3ST1Q99999 423 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 SYT3Q9BQG1 590 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 METTL9Q9H1A3 318 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 GSX1Q9H4S2 264 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-203ENST00000434601 PLEKHF2Q9H8W4 249 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 ELL3Q9HB65 397 aaPredicted RBP9.59□□□□□ -0.87
LINC00539-203ENST00000434601 DIABLOQ9NR28 239 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 ABCB10Q9NRK6 738 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 CA10Q9NS85 328 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 IL36GQ9NZH8 169 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 DUSP13Q9UII6 198 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 POU2F3Q9UKI9 436 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 ATP23Q9Y6H3 246 aa9.59□□□□□ -0.87
LINC00539-203ENST00000434601 DSCAMO60469 2012 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 IGKV1-12A0A0C4DH73 117 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 A0A1B0GWJ7 208 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 LRP5LA4QPB2 252 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 TMEM210A6NLX4 147 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 J3QT63 122 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 CTDSPLO15194 276 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 MLNRO43193 412 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF780AO75290 641 aaPredicted RBP9.58□□□□□ -0.88
LINC00539-203ENST00000434601 CYB5AP00167 134 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 IGKV1D-12P01611 117 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 CD3EP07766 207 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 MGMTP16455 207 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 HAAOP46952 286 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 SELENOVP59797 346 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 IFITM3Q01628 133 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 GPR176Q14439 515 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 RSU1Q15404 277 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 TRIQKQ629K1 86 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 RAB12Q6IQ22 244 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 Q6ZR03 302 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 SLC25A26Q70HW3 274 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 ZNF573Q86YE8 665 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 SAXO1Q8IYX7 474 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 Q8N402 240 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 TMEM104Q8NE00 496 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 OR10AD1Q8NGE0 317 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 NUDT16L1Q9BRJ7 211 aaKnown RBP9.58□□□□□ -0.88
LINC00539-203ENST00000434601 URM1Q9BTM9 101 aaKnown RBP9.58□□□□□ -0.88
LINC00539-203ENST00000434601 MRPL37Q9BZE1 423 aaKnown RBP9.58□□□□□ -0.88
LINC00539-203ENST00000434601 PKIBQ9C010 78 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 LPAR5Q9H1C0 372 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 BANF2Q9H503 90 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 C14orf119Q9NWQ9 140 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 NKIRAS2Q9NYR9 191 aa9.58□□□□□ -0.88
LINC00539-203ENST00000434601 MRPS7Q9Y2R9 242 aaKnown RBP9.58□□□□□ -0.88
LINC00539-203ENST00000434601 HEATR1Q9H583 2144 aaKnown RBP9.58□□□□□ -0.88
LINC00539-203ENST00000434601 JMJD1CQ15652 2540 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 A0A0A6YYD4 124 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 ZSCAN5BA6NJL1 495 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 SHISA9B4DS77 424 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 H0YL77 283 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 HTR3BO95264 441 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 HLA-DQB1P01920 261 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 CSTBP04080 98 aaKnown RBP9.57□□□□□ -0.88
LINC00539-203ENST00000434601 CHRM2P08172 466 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 CSF3P09919 207 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 IL7P13232 177 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 CPT2P23786 658 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 MPZP25189 248 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 PTH2RP49190 550 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 RPS27AP62979 156 aaKnown RBP9.57□□□□□ -0.88
LINC00539-203ENST00000434601 MRPS10P82664 201 aaKnown RBP9.57□□□□□ -0.88
LINC00539-203ENST00000434601 MZT1Q08AG7 82 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 IL24Q13007 206 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 BAK1Q16611 211 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 MOGAT2Q3SYC2 334 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 STEAP3Q658P3 488 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 HAGHLQ6PII5 290 aaPredicted RBP9.57□□□□□ -0.88
LINC00539-203ENST00000434601 WDR86Q86TI4 376 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 LYSMD2Q8IV50 215 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 MKXQ8IYA7 352 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 SPERTQ8NA61 448 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 WFDC11Q8NEX6 87 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 OR51F2Q8NH61 342 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 NICN1Q9BSH3 213 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 TM2D1Q9BX74 207 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 SELENOIQ9C0D9 397 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 OR51I2Q9H344 312 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 MSL2Q9HCI7 577 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 PCDHB16Q9NRJ7 776 aa9.57□□□□□ -0.88
LINC00539-203ENST00000434601 TAAR3PQ9P1P4 343 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms