RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 DLX6P56179 175 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 CDK5Q00535 292 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 APOFQ13790 326 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 SSX2Q16385 188 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 ARSJQ5FYB0 599 aaPredicted RBP12□□□□□ -0.49
PRKDC-203ENST00000432581 ZNF626Q68DY1 528 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 TMEM219Q86XT9 240 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 OR11H6Q8NGC7 330 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 LRGUKQ96M69 825 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 CHID1Q9BWS9 393 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 MOB1AQ9H8S9 216 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 HES4Q9HCC6 221 aa12□□□□□ -0.49
PRKDC-203ENST00000432581 NBEAL2Q6ZNJ1 2754 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 PQLC2LA1A4F0 135 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 B2RBV5 119 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 H3BUI4 141 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 K7N7A8 449 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 GNGT2O14610 69 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 E2F6O75461 281 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 ZNF728P0DKX0 622 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 CD33P20138 364 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 MPZP25189 248 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 VDAC2P45880 294 aaPredicted RBP11.99□□□□□ -0.49
PRKDC-203ENST00000432581 OR12D2P58182 307 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 MS4A2Q01362 244 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 FOXB2Q5VYV0 432 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 TMEM42Q69YG0 159 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 WFDC9Q8NEX5 89 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 IKZF2Q9UKS7 526 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 DNAH3Q8TD57 4116 aa11.99□□□□□ -0.49
PRKDC-203ENST00000432581 DHRS7CA6NNS2 312 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 F2RL2O00254 374 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 TTRP02766 147 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 CHRM2P08172 466 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 IGHV1-8P0DP01 117 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 HOXB6P17509 224 aaKnown RBP11.98□□□□□ -0.49
PRKDC-203ENST00000432581 ERVK11-1P61568 191 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 ESRRGP62508 458 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 DYNC1I2Q13409 638 aaKnown RBP11.98□□□□□ -0.49
PRKDC-203ENST00000432581 MINOS1Q5TGZ0 78 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 ASRGL1Q7L266 308 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 PIGWQ7Z7B1 504 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 ASCC1Q8N9N2 400 aaKnown RBP11.98□□□□□ -0.49
PRKDC-203ENST00000432581 ASB9Q96DX5 294 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 OR5M11Q96RB7 305 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 PKIBQ9C010 78 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 SLC25A19Q9HC21 320 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 GPR173Q9NS66 373 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 DNAJB9Q9UBS3 223 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 SLC22A13Q9Y226 551 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 MINOS1-NBL1R4GNA1 71 aa11.98□□□□□ -0.49
PRKDC-203ENST00000432581 PRR32B1ATL7 298 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 LOC110117498-PIK3R3F6TDL0 507 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 MRPL3P09001 348 aaKnown RBP11.97□□□□□ -0.49
PRKDC-203ENST00000432581 ANXA8P13928 327 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 AZGP1P25311 298 aaKnown RBP11.97□□□□□ -0.49
PRKDC-203ENST00000432581 EDDM3BP56851 147 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 ACTR3P61158 418 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 COL10A1Q03692 680 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 MEF2CQ06413 473 aaPredicted RBP11.97□□□□□ -0.49
PRKDC-203ENST00000432581 MFGE8Q08431 387 aaPredicted RBP11.97□□□□□ -0.49
PRKDC-203ENST00000432581 IL24Q13007 206 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 SNAPC1Q16533 368 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 LDLRAD2Q5SZI1 272 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 BCL2L15Q5TBC7 163 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 GDPD3Q7L5L3 318 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 TMEM179BQ7Z7N9 219 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 ADGRG5Q8IZF4 528 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 ZNF714Q96N38 554 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 CNN2Q99439 309 aaKnown RBP11.97□□□□□ -0.49
PRKDC-203ENST00000432581 GTF2A1LQ9UNN4 478 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 COPS3Q9UNS2 423 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 V9GYS6 101 aa11.97□□□□□ -0.49
PRKDC-203ENST00000432581 CCDC182A6NF36 153 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 ZNF737O75373 536 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 SRSF10O75494 262 aaKnown RBP11.96□□□□□ -0.49
PRKDC-203ENST00000432581 PF4V1P10720 104 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 IGLL1P15814 213 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 BLCAPP62952 87 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 CD83Q01151 205 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 SLC34A1Q06495 639 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 VAX1Q5SQQ9 334 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 TMEM236Q5W0B7 351 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 ELMOD2Q8IZ81 293 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 OR8H2Q8N162 312 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 BATF2Q8N1L9 274 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 OR5AU1Q8NGC0 362 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 OR14K1Q8NGZ2 314 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 NSL1Q96IY1 281 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 MNTQ99583 582 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 OCSTAMPQ9BR26 566 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.96□□□□□ -0.49
PRKDC-203ENST00000432581 TVP23BQ9NYZ1 205 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.96□□□□□ -0.49
PRKDC-203ENST00000432581 SLC7A11Q9UPY5 501 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 R4GMQ9 66 aa11.96□□□□□ -0.49
PRKDC-203ENST00000432581 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 hADV38S2A0JD32 116 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 DNAJC8O75937 253 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-203ENST00000432581 MPIG6BO95866 241 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms