RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SHPKQ9UHJ6 478 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 LOC100509620A0A075B734 347 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 FXYD6-FXYD2A0A087WZ82 144 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 A0A0D9SG52 128 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 OR5H14A6NHG9 310 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 ERVH48-1M5A8F1 160 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 ARPC5O15511 151 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 SLC25A4P12235 298 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 PMELP40967 661 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 PDZK1IP1Q13113 114 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 DMRTC1Q5HYR2 192 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 C6orf183Q5T699 404 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 PLCXD3Q63HM9 321 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 RFPL4BQ6ZWI9 263 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 OVCH2Q7RTZ1 564 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 LHFPL1Q86WI0 220 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 WDYHV1Q96HA8 205 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
DDX56-204ENST00000431640 GSX2Q9BZM3 304 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 FXYD6Q9H0Q3 95 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 ZNF175Q9Y473 711 aa11.11□□□□□ -0.63
DDX56-204ENST00000431640 TPD52L2O43399 206 aaKnown RBP11.1□□□□□ -0.63
DDX56-204ENST00000431640 RP2O75695 350 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 EDN3P14138 238 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 VAMP1P23763 118 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 DTYMKP23919 212 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 GABRR1P24046 479 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 TNFSF10P50591 281 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 RAB1AP62820 205 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 SORDQ00796 357 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 HLXQ14774 488 aaPredicted RBP11.1□□□□□ -0.63
DDX56-204ENST00000431640 ESCO2Q56NI9 601 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 C17orf107Q6ZR85 190 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 PEG10Q86TG7 708 aaKnown RBP11.1□□□□□ -0.63
DDX56-204ENST00000431640 ZNF546Q86UE3 836 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 OSR2Q8N2R0 312 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 KDF1Q8NAX2 398 aaPredicted RBP11.1□□□□□ -0.63
DDX56-204ENST00000431640 ADAD2Q8NCV1 583 aaKnown RBP11.1□□□□□ -0.63
DDX56-204ENST00000431640 EMG1Q92979 244 aaKnown RBP11.1□□□□□ -0.63
DDX56-204ENST00000431640 WDR89Q96FK6 387 aaPredicted RBP11.1□□□□□ -0.63
DDX56-204ENST00000431640 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 DEFB127Q9H1M4 99 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 ZDHHC11Q9H8X9 412 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 GLRX2Q9NS18 164 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 NBEAQ8NFP9 2946 aa11.1□□□□□ -0.63
DDX56-204ENST00000431640 IGKV1-27A0A075B6S5 117 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 A0A096LPE4 126 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 A0A1W2PPZ6 126 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 SPRY1O43609 319 aaPredicted RBP11.09□□□□□ -0.63
DDX56-204ENST00000431640 PLEKHN1Q494U1 663 aaPredicted RBP11.09□□□□□ -0.63
DDX56-204ENST00000431640 RPUSD3Q6P087 351 aaKnown RBP11.09□□□□□ -0.63
DDX56-204ENST00000431640 C6orf201Q7Z4U5 140 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 RTN4RL2Q86UN3 420 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 SAXO1Q8IYX7 474 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 OR51F2Q8NH61 342 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 COQ8AQ8NI60 647 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 NANOS1Q8WY41 292 aaKnown RBP11.09□□□□□ -0.63
DDX56-204ENST00000431640 DHRS9Q9BPW9 319 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 ARL6Q9H0F7 186 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 EHFQ9NZC4 300 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 OSGIN2Q9Y236 505 aa11.09□□□□□ -0.63
DDX56-204ENST00000431640 C5orf49A4QMS7 147 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A10PA6NDY2 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A18PA6NE21 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A16PA6NEW6 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A20PA6NIJ5 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A8PA6NJQ4 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 SLC22A20A6NK97 555 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A7PA6NKC0 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FIGNL2A6NMB9 653 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 DBX1A6NMT0 343 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A22PA8MWA6 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A12PA8MX19 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A5PA8MXJ8 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A23PA8MXZ1 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 ANGPTL7O43827 346 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 SFT2D2O95562 160 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 CST4P01036 141 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 HLA-HP01893 362 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A15PP0C7V4 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A13PP0C7W8 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A14PP0C7W9 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FAM90A24PP0C7X0 464 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 CD79AP11912 226 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 MPGP29372 298 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 CALCRP30988 508 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 NPY4RP50391 375 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 UCNP55089 124 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 ARPC4P59998 168 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 PMP22Q01453 160 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 TAF9Q16594 264 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 NKAPLQ5M9Q1 402 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 FBXW9Q5XUX1 488 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 GSG1LQ6UXU4 331 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 MRPL21Q7Z2W9 205 aaKnown RBP11.08□□□□□ -0.64
DDX56-204ENST00000431640 NUFIP2Q7Z417 695 aaKnown RBP11.08□□□□□ -0.64
DDX56-204ENST00000431640 OR5L1Q8NGL2 311 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 OR6K3Q8NGY3 331 aa11.08□□□□□ -0.64
DDX56-204ENST00000431640 OR13G1Q8NGZ3 307 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms