RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CEBPDP49716 269 aaPredicted RBP12.07□□□□□ -0.48
MSH5-208ENST00000429846 ERVK11-1P61568 191 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 IL24Q13007 206 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 PTGES3Q15185 160 aaKnown RBP12.07□□□□□ -0.48
MSH5-208ENST00000429846 BEAN1Q3B7T3 259 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 DNAL1Q4LDG9 190 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 NXNL2Q5VZ03 156 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 FAHD1Q6P587 224 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 Q6ZSR3 168 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 ASRGL1Q7L266 308 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 MEPCEQ7L2J0 689 aaKnown RBP12.07□□□□□ -0.48
MSH5-208ENST00000429846 OR4M1Q8NGD0 313 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 GPR173Q9NS66 373 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 H2AFY2Q9P0M6 372 aaPredicted RBP12.07□□□□□ -0.48
MSH5-208ENST00000429846 OR14J1Q9UGF5 321 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 PITPNC1Q9UKF7 332 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 OR52A1Q9UKL2 312 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 FOXJ3Q9UPW0 622 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 SNX5Q9Y5X3 404 aa12.07□□□□□ -0.48
MSH5-208ENST00000429846 C17orf98A8MV24 154 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 ZNF670-ZNF695F2Z2N8 137 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 K7N7A8 449 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 PRKYO43930 277 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 SAMD5Q5TGI4 173 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 ZNF782Q6ZMW2 699 aaPredicted RBP12.06□□□□□ -0.48
MSH5-208ENST00000429846 REC114Q7Z4M0 266 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 SLC35F2Q8IXU6 374 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 Q8N2B8 174 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 OR13D1Q8NGV5 346 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 OR14K1Q8NGZ2 314 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 PIFOQ8TCI5 191 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 RPS4Y2Q8TD47 263 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 PPP1R14AQ96A00 147 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 PLEKHA1Q9HB21 404 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 CLN6Q9NWW5 311 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
MSH5-208ENST00000429846 A0A1B0GTI1 187 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 ODF3BA8MYP8 253 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 G3V4G9 280 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 GYG2O15488 501 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 VSIG10L2P0DP72 767 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 CCL1P22362 96 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 DAPP51397 102 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 DLX6P56179 175 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 ZNF626Q68DY1 528 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 LHFPL4Q7Z7J7 247 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 GID4Q8IVV7 300 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 C11orf44Q8N8P7 122 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 ASCC1Q8N9N2 400 aaKnown RBP12.05□□□□□ -0.48
MSH5-208ENST00000429846 MALSU1Q96EH3 234 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 NKX3-1Q99801 234 aaPredicted RBP12.05□□□□□ -0.48
MSH5-208ENST00000429846 APOL4Q9BPW4 351 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 ZNF702PQ9H963 129 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 ADGRL4Q9HBW9 690 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 ABCB10Q9NRK6 738 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 SLC7A11Q9UPY5 501 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 SLC22A13Q9Y226 551 aa12.05□□□□□ -0.48
MSH5-208ENST00000429846 MEGF11A6BM72 1044 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 XPNPEP2O43895 674 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 ZNF737O75373 536 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 FBXO24O75426 580 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 ARG1P05089 322 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 KRT8P05787 483 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 CHRM2P08172 466 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 ZNF728P0DKX0 622 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 PIPP12273 146 aaPredicted RBP12.04□□□□□ -0.48
MSH5-208ENST00000429846 PAX6P26367 422 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 DYNLT3P51808 116 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 CNN3Q15417 329 aaKnown RBP12.04□□□□□ -0.48
MSH5-208ENST00000429846 FBLN7Q53RD9 439 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 AADACL4Q5VUY2 407 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 SLX4IPQ5VYV7 408 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 GDPD3Q7L5L3 318 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 OR8H2Q8N162 312 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 CCDC54Q8NEL0 328 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 OR4S1Q8NGB4 309 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 OR11H6Q8NGC7 330 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 TMEM163Q8TC26 289 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 CEP19Q96LK0 163 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 KRT84Q9NSB2 600 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 ENOPH1Q9UHY7 261 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 MRM2Q9UI43 246 aaKnown RBP12.04□□□□□ -0.48
MSH5-208ENST00000429846 POMPQ9Y244 141 aa12.04□□□□□ -0.48
MSH5-208ENST00000429846 GATBO75879 557 aaKnown RBP12.03□□□□□ -0.48
MSH5-208ENST00000429846 IGHV1-8P0DP01 117 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 EDDM3BP56851 147 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 EFNB1P98172 346 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 COL10A1Q03692 680 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 EMX1Q04741 257 aaPredicted RBP12.03□□□□□ -0.48
MSH5-208ENST00000429846 MEF2CQ06413 473 aaPredicted RBP12.03□□□□□ -0.48
MSH5-208ENST00000429846 FAM189A2Q15884 450 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 C12orf73Q69YU5 71 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 PLEKHG7Q6ZR37 379 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 ANGPTL5Q86XS5 388 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 TCEANCQ8N8B7 351 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 C10orf35Q96D05 121 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 ZNF714Q96N38 554 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 CHST5Q9GZS9 411 aa12.03□□□□□ -0.48
MSH5-208ENST00000429846 SEBOXQ9HB31 216 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms