RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 LYPD2Q6UXB3 125 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 RBMS3Q6XE24 437 aaKnown RBP7.56□□□□□ -1.2
SMC1A-203ENST00000428014 MOB3CQ70IA8 216 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 SERPINA12Q8IW75 414 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 CDH26Q8IXH8 852 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 MKXQ8IYA7 352 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 BPIFB2Q8N4F0 458 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 Q8NFD4 153 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 OR52I1Q8NGK6 324 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 OR5D14Q8NGL3 314 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 OR5D13Q8NGL4 314 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 BORCS8Q96FH0 119 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 WDFY2Q96P53 400 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 COMMD4Q9H0A8 199 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 SIRPDQ9H106 197 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 VCX3BQ9H321 246 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 NCOR1P1Q9H4R4 102 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 POMT1Q9Y6A1 747 aa7.56□□□□□ -1.2
SMC1A-203ENST00000428014 CUBNO60494 3623 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 IGKV1D-17A0A075B6S4 117 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 TRBV2A0A0J9YWF9 115 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 hCG_1809904A0A1W2PP81 198 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 A0A1W2PPE2 198 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 A0A1W2PR64 198 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 A0A1W2PRV1 198 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 TMEM89A2RUT3 159 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 RNF212BA8MTL3 300 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 SLC1A7O00341 560 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 RPP14O95059 124 aaKnown RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 CYB5AP00167 134 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 GYPAP02724 150 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 ALDOBP05062 364 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 CD2P06729 351 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 PSG2P11465 335 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 MYL12AP19105 171 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 PRTN3P24158 256 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 NANOS3P60323 173 aaKnown RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 SLC34A1Q06495 639 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 UBE2V2Q15819 145 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 FAM201AQ5SY85 155 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 SFRP4Q6FHJ7 346 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 FIP1L1Q6UN15 594 aaKnown RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 KCTD8Q6ZWB6 473 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 BTN2A1Q7KYR7 527 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 C8orf59Q8N0T1 100 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF485Q8NCK3 441 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 TFAP2CQ92754 450 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 RPL3LQ92901 407 aaKnown RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 C4orf36Q96KX1 117 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 GAFA1Q96PS6 74 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 TBX5Q99593 518 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 MDFIQ99750 246 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 METTL8Q9H825 291 aaKnown RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 SMURF1Q9HCE7 757 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 BABAM2Q9NXR7 383 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 SLC25A10Q9UBX3 287 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-203ENST00000428014 MYRFQ9Y2G1 1151 aa7.55□□□□□ -1.2
SMC1A-203ENST00000428014 A0A1B0GUS0 222 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 K7N7A8 449 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 OGG1O15527 345 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 AKR7A2O43488 359 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 FCN3O75636 299 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 RHBDL1O75783 438 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 TOX4O94842 621 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 ZFPL1O95159 310 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 ATP6V1G2O95670 118 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 CSN2P05814 226 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
SMC1A-203ENST00000428014 CHRM2P08172 466 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 ATF1P18846 271 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 LMO1P25800 156 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 PEX2P28328 305 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 ERP29P30040 261 aaKnown RBP7.54□□□□□ -1.2
SMC1A-203ENST00000428014 HSPA13P48723 471 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 FGF12P61328 243 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 MEF2CQ06413 473 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-203ENST00000428014 BLMHQ13867 455 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 KRTAP24-1Q3LI83 254 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 TP53I3Q53FA7 332 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 CEP78Q5JTW2 689 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 ELP2Q6IA86 826 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 IL17RELQ6ZVW7 336 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 LDLRAD3Q86YD5 345 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 DTX3Q8N9I9 347 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 CHST4Q8NCG5 386 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 PXT1Q8NFP0 134 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 OR5AK2Q8NH90 309 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 PPP1R35Q8TAP8 253 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 GPR148Q8TDV2 347 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 GATAD2BQ8WXI9 593 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 PPP1R14AQ96A00 147 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 SMIM19Q96E16 107 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 TMEM80Q96HE8 168 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 CEP19Q96LK0 163 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 OPALINQ96PE5 141 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 WDR13Q9H1Z4 485 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 ZCCHC4Q9H5U6 513 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 FKBP14Q9NWM8 211 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 CHCHD3Q9NX63 227 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms