RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 JTBO76095 146 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 GADD45GO95257 159 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 SPI1P17947 270 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 MAP2K3P46734 347 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 GSSP48637 474 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 CBX1P83916 185 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 PLCXD3Q63HM9 321 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-206ENST00000426196 ERI1Q8IV48 349 aaKnown RBP11.2□□□□□ -0.62
HDAC6-206ENST00000426196 OR4Q3Q8NH05 313 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 OR8U1Q8NH10 309 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 ISOC1Q96CN7 298 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 TMEM133Q9H2Q1 129 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 POLDIP2Q9Y2S7 368 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 HSPE1-MOB4S4R3N1 261 aa11.2□□□□□ -0.62
HDAC6-206ENST00000426196 FRAS1Q86XX4 4008 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 hADV38S2A0JD32 116 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 J3QT63 122 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 NOS1APO75052 506 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-206ENST00000426196 SNRNP70P08621 437 aaKnown RBP11.19□□□□□ -0.62
HDAC6-206ENST00000426196 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-206ENST00000426196 TSPAN31Q12999 210 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 KLF10Q13118 480 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 MOB3CQ70IA8 216 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 SHFQ7M4L6 423 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 OR8B12Q8NGG6 310 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 GNPDA2Q8TDQ7 276 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 C7orf34Q96L11 122 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 NOL4LQ96MY1 436 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-206ENST00000426196 INTS14Q96SY0 518 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 NRIP2Q9BQI9 281 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 EGLN3Q9H6Z9 239 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 NIPAL2Q9H841 368 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 SCOCQ9UIL1 159 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 RAB21Q9UL25 225 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 SLC22A13Q9Y226 551 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 CDH10Q9Y6N8 788 aa11.19□□□□□ -0.62
HDAC6-206ENST00000426196 SERPINE3A8MV23 424 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 LEUTXA8MZ59 168 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 CLUP10909 449 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 HAAOP46952 286 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 CRMP1Q14194 572 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 EDDM3AQ14507 147 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 KRT74Q7RTS7 529 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 TCF23Q7RTU1 214 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 OVCH2Q7RTZ1 564 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 ZNF573Q86YE8 665 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 SLC15A3Q8IY34 581 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 RP9Q8TA86 221 aaKnown RBP11.18□□□□□ -0.62
HDAC6-206ENST00000426196 ZNF596Q8TC21 504 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 AMELYQ99218 206 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 DCAF13Q9NV06 445 aaKnown RBP11.18□□□□□ -0.62
HDAC6-206ENST00000426196 LINC00312Q9Y6C7 94 aa11.18□□□□□ -0.62
HDAC6-206ENST00000426196 NCK1P16333 377 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 CEACAM3P40198 252 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 MNDAP41218 407 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 NUDT2P50583 147 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
HDAC6-206ENST00000426196 BDH1Q02338 343 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 DEFB136Q30KP8 78 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 LCN1P1Q5VSP4 162 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 COMMD2Q86X83 199 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 OR8H2Q8N162 312 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 BATF2Q8N1L9 274 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 ABHD12Q8N2K0 398 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 ITFG2Q969R8 447 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 RCN3Q96D15 328 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 NMNAT2Q9BZQ4 307 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 HES4Q9HCC6 221 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 HHLA2Q9UM44 414 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 SIRT4Q9Y6E7 314 aaPredicted RBP11.17□□□□□ -0.62
HDAC6-206ENST00000426196 ALMS1Q8TCU4 4167 aa11.17□□□□□ -0.62
HDAC6-206ENST00000426196 PSMD9O00233 223 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 GSC2O15499 205 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 ZNF737O75373 536 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 FRMD6-AS1P0C7T7 363 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 GSTT1P30711 240 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 INSL3P51460 131 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 RIPPLY1Q0D2K3 151 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 ZNF684Q5T5D7 378 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 LINC01590Q5TEZ4 76 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 OR52W1Q6IF63 320 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 CCDC144NLQ6NUI1 221 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 LCNL1Q6ZST4 164 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 RTN4RL2Q86UN3 420 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 CREB3L1Q96BA8 519 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 KCTD14Q9BQ13 255 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-206ENST00000426196 DCLRE1BQ9H816 532 aa11.16□□□□□ -0.62
HDAC6-206ENST00000426196 SAMD4AQ9UPU9 718 aaKnown RBP11.16□□□□□ -0.62
HDAC6-206ENST00000426196 HERC2O95714 4834 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 A0A0U1RQV5 110 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 NME4O00746 187 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 NRASP01111 189 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 IFNGP01579 166 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 LYNP07948 512 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 ATP6V1B1P15313 513 aa11.15□□□□□ -0.62
HDAC6-206ENST00000426196 KIR2DS1Q14954 304 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms