RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TUBAL3A6NHL2 446 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 F5H0A9 414 aaPredicted RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 CD8AP01732 235 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 APOC3P02656 99 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 ZP3P21754 424 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 SUPT4H1P63272 117 aaKnown RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 SRSF6Q13247 344 aaKnown RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 IGFBP7Q16270 282 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 VAX1Q5SQQ9 334 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 SLC51BQ86UW2 128 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 CALHM1Q8IU99 346 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 ZSCAN4Q8NAM6 433 aaPredicted RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 OR5AP2Q8NGF4 316 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 OR51F2Q8NH61 342 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 OR1S1Q8NH92 325 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 ST8SIA2Q92186 375 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 DCUN1D4Q92564 292 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 NARS2Q96I59 477 aaKnown RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 PAPOLGQ9BWT3 736 aaKnown RBP10.03□□□□□ -0.8
UBR4-207ENST00000425413 TNFSF18Q9UNG2 199 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 ZFHX4Q86UP3 3567 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 KIAA1549Q9HCM3 1950 aa10.03□□□□□ -0.8
UBR4-207ENST00000425413 FIGNL2A6NMB9 653 aa10.02□□□□□ -0.8
UBR4-207ENST00000425413 FOXI3A8MTJ6 420 aaPredicted RBP10.02□□□□□ -0.8
UBR4-207ENST00000425413 HSPB6O14558 160 aa10.02□□□□□ -0.8
UBR4-207ENST00000425413 NPBWR2P48146 333 aa10.02□□□□□ -0.8
UBR4-207ENST00000425413 MEOX1P50221 254 aa10.02□□□□□ -0.8
UBR4-207ENST00000425413 PPIAP62937 165 aaKnown RBP10.02□□□□□ -0.8
UBR4-207ENST00000425413 FGL1Q08830 312 aa10.02□□□□□ -0.8
UBR4-207ENST00000425413 CNN3Q15417 329 aaKnown RBP10.02□□□□□ -0.8
UBR4-207ENST00000425413 EMG1Q92979 244 aaKnown RBP10.02□□□□□ -0.8
UBR4-207ENST00000425413 CMSS1Q9BQ75 279 aaKnown RBP10.02□□□□□ -0.8
UBR4-207ENST00000425413 NUDT16L1Q9BRJ7 211 aaKnown RBP10.02□□□□□ -0.8
UBR4-207ENST00000425413 GHRLQ9UBU3 117 aa10.02□□□□□ -0.8
UBR4-207ENST00000425413 SHANK1Q9Y566 2161 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 OTOGLQ3ZCN5 2332 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 SERPINE3A8MV23 424 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 NGFP01138 241 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 HOXD4P09016 255 aaPredicted RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 NAT1P18440 290 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 MPZP25189 248 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 AGTR1P30556 359 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 PCBD1P61457 104 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 PMP22Q01453 160 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 RPUSD3Q6P087 351 aaKnown RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 SLC25A26Q70HW3 274 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 NUFIP2Q7Z417 695 aaKnown RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 INO80EQ8NBZ0 244 aaPredicted RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 OR56B2PQ8NGI1 322 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 OR5M9Q8NGP3 310 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 SPSB1Q96BD6 273 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 GPR87Q9BY21 358 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 ST3GAL6Q9Y274 331 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 ZFHX2Q9C0A1 2572 aaPredicted RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 hCG_38984A0A1B0GV85 526 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 OR7C1O76099 320 aaPredicted RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 MMP7P09237 267 aaPredicted RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 CBX5P45973 191 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 TAS2R46P59540 309 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 S100A10P60903 97 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 FAM189A2Q15884 450 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 JMJD6Q6NYC1 403 aaPredicted RBP10.02□□□□□ -0.81
UBR4-207ENST00000425413 OVCH2Q7RTZ1 564 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 MCEMP1Q8IX19 187 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 ZNF100Q8IYN0 542 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 OR6K3Q8NGY3 331 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 OR10C1Q96KK4 312 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 LIME1Q9H400 295 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 LDAHQ9H6V9 325 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 SLC7A11Q9UPY5 501 aa10.02□□□□□ -0.81
UBR4-207ENST00000425413 SFT2D2O95562 160 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 FPR2P25090 351 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 PSMB6P28072 239 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 DUSP1P28562 367 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 ALDH3B1P43353 468 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 TAS2R31P59538 309 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 SP6Q3SY56 376 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 ACTBL2Q562R1 376 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 RIPPLY2Q5TAB7 128 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 LPCAT3Q6P1A2 487 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 OR10AD1Q8NGE0 317 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 TM2D1Q9BX74 207 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 TMEM9BQ9NQ34 198 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 C12orf4Q9NQ89 552 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 OSGIN2Q9Y236 505 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 A0A0B4J2A0 478 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 IGHV3-64DA0A0J9YX35 117 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 TEX13DA0A0J9YY54 714 aaPredicted RBP10.01□□□□□ -0.81
UBR4-207ENST00000425413 A0A1W2PR80 420 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 C21orf140B9A014 251 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 SNAPC5O75971 98 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 CRHP06850 196 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 OR5H8P0DN80 308 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 TMEM200AQ86VY9 491 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 KCNRGQ8N5I3 272 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 BVESQ8NE79 360 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 PXT1Q8NFP0 134 aa10.01□□□□□ -0.81
UBR4-207ENST00000425413 ADAMTS17Q8TE56 1095 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms