RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CD80P33681 288 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 SCN1BQ07699 218 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 RSU1Q15404 277 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 DGUOKQ16854 277 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 MOGAT2Q3SYC2 334 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 ZNF404Q494X3 552 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 C1orf100Q5SVJ3 147 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 OR6M1Q8NGM8 313 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 MIXL1Q9H2W2 232 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 FAIMQ9NVQ4 179 aa11.34□□□□□ -0.59
PRPF39-202ENST00000424478 FCER2P06734 321 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 SLC25A38Q96DW6 304 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 CCL19Q99731 98 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 MS4A5Q9H3V2 200 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 NARFLQ9H6Q4 476 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 ELF5Q9UKW6 265 aaPredicted RBP11.33□□□□□ -0.6
PRPF39-202ENST00000424478 ZDHHC8Q9ULC8 765 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 LRP5LA4QPB2 252 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 ALDOBP05062 364 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 FAM76BQ5HYJ3 339 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 ZNF573Q86YE8 665 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 YIPF5Q969M3 257 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 S100A13Q99584 98 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 SELENOIQ9C0D9 397 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 OR14J1Q9UGF5 321 aa11.33□□□□□ -0.6
PRPF39-202ENST00000424478 ELK1P19419 428 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 GABRR1P24046 479 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 TAF9Q16594 264 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DTX2Q86UW9 622 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 PERPQ96FX8 193 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 C14orf119Q9NWQ9 140 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 IL19Q9UHD0 177 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 KIAA2026Q5HYC2 2103 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 A0A0A6YYD4 124 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 A0A1B0GW55 424 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 A0A1B0GWJ7 208 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 J3QT63 122 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4L2P0CJ85 424 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4L3P0CJ86 424 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4L4P0CJ87 422 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4L5P0CJ88 424 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4L6P0CJ89 424 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4L7P0CJ90 424 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 PRKACAP17612 351 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 CD200P41217 278 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 EVX1P49640 407 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 RNASE12Q5GAN4 147 aaKnown RBP11.32□□□□□ -0.6
PRPF39-202ENST00000424478 AVPI1Q5T686 147 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4L9Q6RFH8 374 aaPredicted RBP11.32□□□□□ -0.6
PRPF39-202ENST00000424478 KRT74Q7RTS7 529 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 GCSAMQ8N6F7 178 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DUX4Q9UBX2 424 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 TNFSF4P23510 183 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 SRP9P49458 86 aaKnown RBP11.32□□□□□ -0.6
PRPF39-202ENST00000424478 DYRK2Q92630 601 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 UQCC2Q9BRT2 126 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 SLC22A4Q9H015 551 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 CYSLTR2Q9NS75 346 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 ARHGAP32A7KAX9 2087 aa11.32□□□□□ -0.6
PRPF39-202ENST00000424478 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.31□□□□□ -0.6
PRPF39-202ENST00000424478 GEMIN2O14893 280 aaKnown RBP11.31□□□□□ -0.6
PRPF39-202ENST00000424478 ALX3O95076 343 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 NXPH2O95156 264 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 PTBP3O95758 552 aaKnown RBP11.31□□□□□ -0.6
PRPF39-202ENST00000424478 MGMTP16455 207 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 QRFPP83859 136 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 MOGQ16653 247 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 CMTM4Q8IZR5 234 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 EMG1Q92979 244 aaKnown RBP11.31□□□□□ -0.6
PRPF39-202ENST00000424478 MRPS7Q9Y2R9 242 aaKnown RBP11.31□□□□□ -0.6
PRPF39-202ENST00000424478 TRAPPC2LH3BP13 241 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 CSTBP04080 98 aaKnown RBP11.31□□□□□ -0.6
PRPF39-202ENST00000424478 SELLP14151 372 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 VEGFCP49767 419 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 OLFML2AQ68BL7 652 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 FGFRL1Q8N441 504 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 CEP19Q96LK0 163 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 TECTBQ96PL2 329 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 METRNQ9UJH8 293 aa11.31□□□□□ -0.6
PRPF39-202ENST00000424478 IGHV1-69-2A0A0G2JMI3 117 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 FAM25AB3EWG3 89 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 FAM25CB3EWG5 89 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 FAM25GB3EWG6 89 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 SOCS1O15524 211 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 SSX4O60224 188 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 BMP4P12644 408 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 GLRA1P23415 457 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 METTL9Q9H1A3 318 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 CLPXO76031 633 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 PSMD7P51665 324 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 FOXRED1Q96CU9 486 aaPredicted RBP11.3□□□□□ -0.6
PRPF39-202ENST00000424478 RHBDL2Q9NX52 303 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 PTTG2Q9NZH5 202 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 ST3GAL6Q9Y274 331 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 PGA5P0DJD9 388 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 CD37P11049 281 aa11.3□□□□□ -0.6
PRPF39-202ENST00000424478 IL24Q13007 206 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms