RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 SLC25A40Q8TBP6 338 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 KLF14Q8TD94 323 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZNRF4Q8WWF5 429 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TRUB1Q8WWH5 349 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 STMN2Q93045 179 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ITFG2Q969R8 447 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SPTSSAQ969W0 71 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CMBLQ96DG6 245 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 UHRF2Q96PU4 802 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 INTS14Q96SY0 518 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TEAD3Q99594 435 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 PITX2Q99697 317 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ATF6BQ99941 703 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 NEURL2Q9BR09 285 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 RHNO1Q9BSD3 238 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 C9orf16Q9BUW7 83 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 HCAR1Q9BXC0 346 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 GABARAPL3Q9BY60 117 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 MRPL37Q9BZE1 423 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 YIPF3Q9GZM5 350 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OR51V1Q9H2C8 321 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SP140LQ9H930 580 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 MED20Q9H944 212 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SCRT2Q9NQ03 307 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 C8orf4Q9NR00 106 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TAAR3PQ9P1P4 343 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 STARD10Q9Y365 291 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ORC6Q9Y5N6 252 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 COMMD3-BMI1R4GMX3 469 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SMG1Q96Q15 3661 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 PRRC2AP48634 2157 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ROS1P08922 2347 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 NAV2Q8IVL1 2488 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 A0A1W2PPW3 197 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 LOC390937A0A1W2PQ73 354 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ACOD1A6NK06 481 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 FAM183AA6NL82 134 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 C15orf62A8K5M9 175 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 NDUFS8O00217 210 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TLX2O43763 284 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 BAG2O95816 211 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CLPTM1O96005 669 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 GYPBP06028 91 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ACSM4P0C7M7 580 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SLC25A16P16260 332 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SELEP16581 610 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SLC2A5P22732 501 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OTX1P32242 354 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 MC5RP33032 325 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ALDH3A2P51648 485 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CDC42P60953 191 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ERVS71-1P61550 626 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 GRB2P62993 217 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 MRPS11P82912 194 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 APOFQ13790 326 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 EIF2B1Q14232 305 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 KLHL12Q53G59 568 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SLC25A30Q5SVS4 291 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 AADACL4Q5VUY2 407 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 NXNL2Q5VZ03 156 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OTPQ5XKR4 325 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CORO6Q6QEF8 472 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 DEGS2Q6QHC5 323 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CLEC2AQ6UVW9 174 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 DRAM2Q6UX65 266 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 FBXW12Q6X9E4 464 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SLC16A9Q7RTY1 509 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 DCXRQ7Z4W1 244 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 LRP11Q86VZ4 500 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TIGD4Q8IY51 512 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF101Q8IZC7 436 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF786Q8N393 782 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CBR4Q8N4T8 237 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 TCEANCQ8N8B7 351 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZBTB8BQ8NAP8 495 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF540Q8NDQ6 660 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OR8J1Q8NGP2 316 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OR6K6Q8NGW6 343 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OR6N2Q8NGY6 317 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OTOSQ8NHW6 89 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ST7LQ8TDW4 575 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SLC7A6Q92536 515 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 RDH5Q92781 318 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 PHF21AQ96BD5 680 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 SLAMF6Q96DU3 332 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ZMYND19Q96E35 227 aaPredicted RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 C18orf12Q96KH6 178 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 RDH12Q96NR8 316 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CIB1Q99828 191 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 ABHD6Q9BV23 337 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 REG4Q9BYZ8 158 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OR2J1Q9GZK6 312 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 OR51B6Q9H340 312 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 RIBC2Q9H4K1 309 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 NIPAL2Q9H841 368 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 WDR76Q9H967 626 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 CENPMQ9NSP4 180 aa2.08□□□□□ -2.08
VPS13A-208ENST00000423463 DDX28Q9NUL7 540 aaKnown RBP2.08□□□□□ -2.08
VPS13A-208ENST00000423463 PTTG2Q9NZH5 202 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms