RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 HMSDA8MTL9 139 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 LGALS8O00214 317 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 RLN2P04090 185 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 LUMP51884 338 aaPredicted RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 FAM3AP98173 230 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 ZMYND11Q15326 602 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 CNN3Q15417 329 aaKnown RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 ABLIM2Q6H8Q1 611 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 GLRX5Q86SX6 157 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 HOGA1Q86XE5 327 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 ZDHHC22Q8N966 263 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 REG4Q9BYZ8 158 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 ZNF442Q9H7R0 627 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 GPR160Q9UJ42 338 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 ST3GAL6Q9Y274 331 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 TEX13DA0A0J9YY54 714 aaPredicted RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 KANTRA0A1W2PQU2 76 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 C21orf140B9A014 251 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 F5H0A9 414 aaPredicted RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 NGFP01138 241 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 S100A6P06703 90 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 CLDN18P56856 261 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 S100A10P60903 97 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 AIMP2Q13155 320 aaKnown RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 SLC10A1Q14973 349 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 FAM189A2Q15884 450 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 PLA2G2CQ5R387 149 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 SPATA46Q5T0L3 261 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 CLEC18BQ6UXF7 455 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 NUFIP2Q7Z417 695 aaKnown RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 C5orf24Q7Z6I8 188 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 INO80EQ8NBZ0 244 aaPredicted RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 OR56B2PQ8NGI1 322 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 NEK7Q8TDX7 302 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 MITD1Q8WV92 249 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 APH1AQ96BI3 265 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 SHANK1Q9Y566 2161 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 NKX2-8O15522 239 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 SP1P08047 785 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 EDN3P14138 238 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 NPBWR2P48146 333 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 ZNF133P52736 654 aaPredicted RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 RAB1AP62820 205 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 MPPED2Q15777 294 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 HIKESHIQ53FT3 197 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 C11orf87Q6NUJ2 197 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 CALHM1Q8IU99 346 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 DCUN1D4Q92564 292 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 RBPMSQ93062 196 aaKnown RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 CHMP1AQ9HD42 196 aaPredicted RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 SLC2A8Q9NY64 477 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 FBLN5Q9UBX5 448 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 ZNF107Q9UII5 783 aaPredicted RBP9.5□□□□□ -0.89
DDX56-203ENST00000421223 AK3Q9UIJ7 227 aa9.5□□□□□ -0.89
DDX56-203ENST00000421223 IGKV1-12A0A0C4DH73 117 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 IGKV1D-12P01611 117 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 IGLV3-1P01715 115 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 PNLIPRP3Q17RR3 467 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 SP6Q3SY56 376 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 TMEM128Q5BJH2 165 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 MRPL21Q7Z2W9 205 aaKnown RBP9.49□□□□□ -0.89
DDX56-203ENST00000421223 GCNT2Q8N0V5 402 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 OR5AP2Q8NGF4 316 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 SULT4A1Q9BR01 284 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 OCSTAMPQ9BR26 566 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 WDR13Q9H1Z4 485 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 PARPBPQ9NWS1 579 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 PRSS50Q9UI38 385 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 GPR132Q9UNW8 380 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 ZNF503-AS2A6NEH8 195 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 DUS4LO95620 317 aaKnown RBP9.49□□□□□ -0.89
DDX56-203ENST00000421223 CALCRP30988 508 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 GPM6AP51674 278 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 SLC51BQ86UW2 128 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 FAM89BQ8N5H3 189 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 ZSCAN4Q8NAM6 433 aaPredicted RBP9.49□□□□□ -0.89
DDX56-203ENST00000421223 OR5T2Q8NGG2 359 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 SSC4DQ8WTU2 575 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 FER1L6-AS2Q96M78 137 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 OR2S2Q9NQN1 319 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 MED9Q9NWA0 146 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 GHRLQ9UBU3 117 aa9.49□□□□□ -0.89
DDX56-203ENST00000421223 C14orf166Q9Y224 244 aaKnown RBP9.49□□□□□ -0.89
DDX56-203ENST00000421223 hCG_1807616A0A1W2PRN6 198 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 MFSD2BA6NFX1 497 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 KLRC4-KLRK1H3BQV0 150 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 CD46P15529 392 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 TAS2R46P59540 309 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 FGL1Q08830 312 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 ZNF660Q6AZW8 331 aaPredicted RBP9.48□□□□□ -0.89
DDX56-203ENST00000421223 ELP2Q6IA86 826 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 RGS7BPQ6MZT1 257 aaPredicted RBP9.48□□□□□ -0.89
DDX56-203ENST00000421223 ARRDC1Q8N5I2 433 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 GALNT11Q8NCW6 608 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 TMEM230Q96A57 120 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 CRIM1Q9NZV1 1036 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 SERPINE3A8MV23 424 aa9.48□□□□□ -0.89
DDX56-203ENST00000421223 SCGB1D2O95969 90 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms