RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 GINS1Q14691 196 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 SMIM21Q3B7S5 101 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ARSJQ5FYB0 599 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-203ENST00000420503 TMEM236Q5W0B7 351 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ZNF626Q68DY1 528 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 OR2T5Q6IEZ7 315 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 KRT74Q7RTS7 529 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 KRT77Q7Z794 578 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 DHFR2Q86XF0 187 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ANGPTL5Q86XS5 388 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 CALHM1Q8IU99 346 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 CPOQ8IVL8 374 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ZNF561Q8N587 486 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 PAPD5Q8NDF8 572 aaKnown RBP10.31□□□□□ -0.76
LINC00339-203ENST00000420503 OR2T29Q8NH02 315 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ZNF671Q8TAW3 534 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 RPS4Y2Q8TD47 263 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 CCDC124Q96CT7 223 aaKnown RBP10.31□□□□□ -0.76
LINC00339-203ENST00000420503 FEVQ99581 238 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 PBOV1Q9GZY1 135 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ABCB9Q9NP78 766 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 INPP5EQ9NRR6 644 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-203ENST00000420503 IL36RNQ9UBH0 155 aa10.31□□□□□ -0.76
LINC00339-203ENST00000420503 TMEM269A0A1B0GVZ9 245 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 TMEM82A0PJX8 343 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 PQLC2LA1A4F0 135 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 CCDC182A6NF36 153 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 OR5B21A6NL26 309 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 PRR23D1E9PI22 279 aaPredicted RBP10.3□□□□□ -0.76
LINC00339-203ENST00000420503 J3QT63 122 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 SLC1A7O00341 560 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 ZNF737O75373 536 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 PEX14O75381 377 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 NXPH2O95156 264 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 TTRP02766 147 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 PRR23D2P0DMB1 279 aaPredicted RBP10.3□□□□□ -0.76
LINC00339-203ENST00000420503 PF4V1P10720 104 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 MAP2K3P46734 347 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 SNCBQ16143 134 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 UTF1Q5T230 341 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 ASRGL1Q7L266 308 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 ASCC1Q8N9N2 400 aaKnown RBP10.3□□□□□ -0.76
LINC00339-203ENST00000420503 OR5A2Q8NGI9 324 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 MYDGFQ969H8 173 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 REEP1Q9H902 201 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 HES4Q9HCC6 221 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00339-203ENST00000420503 ABCB10Q9NRK6 738 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 POMPQ9Y244 141 aa10.3□□□□□ -0.76
LINC00339-203ENST00000420503 A0A0U1RQV5 110 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 FAM172BPA6NC97 362 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 M0R129 80 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 F2RL2O00254 374 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 NRASP01111 189 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 IGHV1-8P0DP01 117 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 EDDM3BP56851 147 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 ERVK11-1P61568 191 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 RPS7P62081 194 aaKnown RBP10.29□□□□□ -0.76
LINC00339-203ENST00000420503 SLC34A1Q06495 639 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 RIPPLY1Q0D2K3 151 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 C18orf65Q6ZTR6 163 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 BCDIN3DQ7Z5W3 292 aaKnown RBP10.29□□□□□ -0.76
LINC00339-203ENST00000420503 OR11H6Q8NGC7 330 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 TRMT10AQ8TBZ6 339 aaKnown RBP10.29□□□□□ -0.76
LINC00339-203ENST00000420503 MALSU1Q96EH3 234 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 RASL12Q9NYN1 266 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 SLC22A13Q9Y226 551 aa10.29□□□□□ -0.76
LINC00339-203ENST00000420503 TBL2Q9Y4P3 447 aaKnown RBP10.29□□□□□ -0.76
LINC00339-203ENST00000420503 IGKV1-27A0A075B6S5 117 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 A0A1B0GTI1 187 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 TCRBV4S1A1TA0A5B7 111 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 AQP12BA6NM10 295 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 K7N7A8 449 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 SRSF10O75494 262 aaKnown RBP10.28□□□□□ -0.76
LINC00339-203ENST00000420503 IGHA1P01876 353 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 PF4P02776 101 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 LPLP06858 475 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 CCDC159P0C7I6 412 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ZNF728P0DKX0 622 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 CALCBP10092 127 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ACTA2P62736 377 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ACTG2P63267 376 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ACTC1P68032 377 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ACTA1P68133 377 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 APOFQ13790 326 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ZNF684Q5T5D7 378 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 TMEM42Q69YG0 159 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 CD300LDQ6UXZ3 194 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ETV3LQ6ZN32 361 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 AQP12AQ8IXF9 295 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 OR52N4Q8NGI2 321 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 FOXRED1Q96CU9 486 aaPredicted RBP10.28□□□□□ -0.76
LINC00339-203ENST00000420503 CHST6Q9GZX3 395 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 MAGIXQ9H6Y5 334 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 ENPP5Q9UJA9 477 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 LAMP5Q9UJQ1 280 aa10.28□□□□□ -0.76
LINC00339-203ENST00000420503 GTF2A1LQ9UNN4 478 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms