RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ZNF442Q9H7R0 627 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 TAS2R8Q9NYW2 309 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 RNF115Q9Y4L5 304 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 ATP23Q9Y6H3 246 aa5.1□□□□□ -1.59
HMGB3-202ENST00000419110 DYSFO75923 2080 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 LINC00854A0A1B0GVQ3 168 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 A0A1W2PP11 408 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 hCG_1807616A0A1W2PRN6 198 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A10PA6NDY2 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A18PA6NE21 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A16PA6NEW6 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 NAP1L6A6NFF2 107 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A20PA6NIJ5 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A8PA6NJQ4 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A7PA6NKC0 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 SERPINE3A8MV23 424 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A22PA8MWA6 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A12PA8MX19 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A5PA8MXJ8 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 VSTM5A8MXK1 200 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A23PA8MXZ1 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 LYRM1O43325 122 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 ANGPTL7O43827 346 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 CLDN14O95500 239 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 CD3GP09693 182 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A15PP0C7V4 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A13PP0C7W8 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A14PP0C7W9 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FAM90A24PP0C7X0 464 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF250P15622 560 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 HIST1H1DP16402 221 aaKnown RBP5.09□□□□□ -1.59
HMGB3-202ENST00000419110 AGAP20933 346 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 GNLYP22749 145 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 GABRR1P24046 479 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 MPZP25189 248 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 CBX5P45973 191 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 UQCRFS1P47985 274 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 PTH2RP49190 550 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 QRFPP83859 136 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 TNP2Q05952 138 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 IL24Q13007 206 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 PLA2G7Q13093 441 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 ARFRP1Q13795 201 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 IL13RA2Q14627 380 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 BAK1Q16611 211 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 PNLIPRP3Q17RR3 467 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 MPV17LQ2QL34 196 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 SMIM21Q3B7S5 101 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 ACTBL2Q562R1 376 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 DMRTC1Q5HYR2 192 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 NKAPLQ5M9Q1 402 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 TRAPPC6BQ86SZ2 158 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM200AQ86VY9 491 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 OSR2Q8N2R0 312 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 CENPSQ8N2Z9 138 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 DTX3Q8N9I9 347 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM104Q8NE00 496 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 OR10K1Q8NGX5 313 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 OR10R2Q8NGX6 335 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 OR51F2Q8NH61 342 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 OR52I2Q8NH67 350 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 LILRB4Q8NHJ6 448 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM171Q8WVE6 324 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 GCDHQ92947 438 aaPredicted RBP5.09□□□□□ -1.59
HMGB3-202ENST00000419110 SLAMF9Q96A28 289 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 MRPL24Q96A35 216 aaKnown RBP5.09□□□□□ -1.59
HMGB3-202ENST00000419110 ELMOD3Q96FG2 381 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 NEDD4LQ96PU5 975 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 SYT3Q9BQG1 590 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 NICN1Q9BSH3 213 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 THAP7Q9BT49 309 aaPredicted RBP5.09□□□□□ -1.59
HMGB3-202ENST00000419110 RHOFQ9HBH0 211 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 SPACA1Q9HBV2 294 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 DYNLRB1Q9NP97 96 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 CA10Q9NS85 328 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM100Q9NV29 134 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 CRIM1Q9NZV1 1036 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 MYEF2Q9P2K5 600 aaKnown RBP5.09□□□□□ -1.59
HMGB3-202ENST00000419110 TBC1D24Q9ULP9 559 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 FZR1Q9UM11 496 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 CACNG2Q9Y698 323 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 PKDREJQ9NTG1 2253 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 ARFGEF3Q5TH69 2177 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 DSCAML1Q8TD84 2053 aa5.09□□□□□ -1.59
HMGB3-202ENST00000419110 EPG5Q9HCE0 2579 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 IGLV3-9A0A075B6K5 115 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 FAM240BA0A1B0GVZ2 78 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 TUBAL3A6NHL2 446 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ZSCAN5BA6NJL1 495 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 A6NJY4 79 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 H7C417 338 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 M0R233 179 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 RAB27BO00194 218 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 MFNGO00587 321 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 MLNRO43193 412 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 TPD52L2O43399 206 aaKnown RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 AKR7A2O43488 359 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 PDCD6O75340 191 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 RBBP9O75884 186 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms