RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 EGLN1Q9GZT9 426 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 MYOZ1Q9NP98 299 aaPredicted RBP7.25□□□□□ -1.25
USP54-203ENST00000418501 WASF3Q9UPY6 502 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 TEX13DA0A0J9YY54 714 aaPredicted RBP7.25□□□□□ -1.25
USP54-203ENST00000418501 LMX1BO60663 402 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 GIPP09681 153 aaPredicted RBP7.25□□□□□ -1.25
USP54-203ENST00000418501 FAM157BP0CG42 384 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 IL24Q13007 206 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 MPPED2Q15777 294 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 SMIM21Q3B7S5 101 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ELP2Q6IA86 826 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 OR2T2Q6IF00 324 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ALKBH2Q6NS38 261 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 HAGHLQ6PII5 290 aaPredicted RBP7.25□□□□□ -1.25
USP54-203ENST00000418501 FBXL14Q8N1E6 418 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 TERB2Q8NHR7 220 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ARHGAP5-AS1Q96IT6 56 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 Q96M66 194 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ICMTO60725 284 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ATG12O94817 140 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 RLN2P04090 185 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ZNF44P15621 663 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 VAMP1P23763 118 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ASCL4Q6XD76 172 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 WDFY1Q8IWB7 410 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 PIAS4Q8N2W9 510 aaPredicted RBP7.25□□□□□ -1.25
USP54-203ENST00000418501 EXTL1Q92935 676 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 NINJ1Q92982 152 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 ZNF71Q9NQZ8 489 aaPredicted RBP7.25□□□□□ -1.25
USP54-203ENST00000418501 ZNF319Q9P2F9 582 aa7.25□□□□□ -1.25
USP54-203ENST00000418501 RBM7Q9Y580 266 aaKnown RBP7.25□□□□□ -1.25
USP54-203ENST00000418501 LOC100509620A0A075B734 347 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 TRGV8A0A0C4DH27 118 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 hCG_1807616A0A1W2PRN6 198 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 MEIS3P1A6NDR6 274 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 LRRC30A6NM36 301 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 IQCF6A8MYZ5 107 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 C1QBP02746 253 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 PRKACAP17612 351 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 FPR2P25090 351 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 RBM11P57052 281 aaKnown RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 KLF3P57682 345 aaPredicted RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 EIF5AP63241 154 aaKnown RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 NKPD1Q17RQ9 610 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 SPIN3Q5JUX0 258 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 SIGIRRQ6IA17 410 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 CMTM1Q8IZ96 169 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 OR8G5Q8NG78 346 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 SLC25A40Q8TBP6 338 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 NUDCD2Q8WVJ2 157 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 OR5P3Q8WZ94 311 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 TAAR6Q96RI8 345 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 OPN3Q9H1Y3 402 aaPredicted RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 OR51B6Q9H340 312 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 FN3KRPQ9HA64 309 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 RASL12Q9NYN1 266 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 E9PLN8 166 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 F5H5P2 479 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 SPRY1O43609 319 aaPredicted RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 SMPD2O60906 423 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 DNASE1P24855 282 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 TAF9Q16594 264 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 NHLRC3Q5JS37 347 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 GSG1LQ6UXU4 331 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 OR5AP2Q8NGF4 316 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 OR10K1Q8NGX5 313 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 UPRTQ96BW1 309 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 SLC6A7Q99884 636 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 VKORC1Q9BQB6 163 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 ESRP2Q9H6T0 727 aaKnown RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 A0A0A6YYJ9 748 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 PQLC2LA1A4F0 135 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 FREM3P0C091 2139 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 IL13RA1P78552 427 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 LINC00303Q3SY05 128 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 SEZ6L2Q6UXD5 910 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 DNM1P46Q6ZS02 220 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 GTF3AQ92664 365 aaKnown RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 STARD4Q96DR4 205 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 NPDC1Q9NQX5 325 aaPredicted RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 ZNF224Q9NZL3 707 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 PURGQ9UJV8 347 aaKnown RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 IFNL4K9M1U5 179 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 MFNGO00587 321 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 LANCL1O43813 399 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 SLC22A5O76082 557 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 CA6P23280 308 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 CEACAM8P31997 349 aaPredicted RBP7.24□□□□□ -1.25
USP54-203ENST00000418501 VWA1Q6PCB0 445 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 THAP6Q8TBB0 222 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 ERGIC1Q969X5 290 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 CSAG2Q9Y5P2 127 aa7.24□□□□□ -1.25
USP54-203ENST00000418501 IGKV1-9A0A0C4DH69 117 aa7.23□□□□□ -1.25
USP54-203ENST00000418501 M0QYG6 137 aa7.23□□□□□ -1.25
USP54-203ENST00000418501 TNFRSF1AP19438 455 aa7.23□□□□□ -1.25
USP54-203ENST00000418501 BMP5P22003 454 aa7.23□□□□□ -1.25
USP54-203ENST00000418501 HRH1P35367 487 aa7.23□□□□□ -1.25
USP54-203ENST00000418501 QRFPP83859 136 aa7.23□□□□□ -1.25
USP54-203ENST00000418501 GUCA2AQ02747 115 aa7.23□□□□□ -1.25
USP54-203ENST00000418501 UNC119Q13432 240 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms