RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 OR2L13Q8N349 312 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 C15orf54Q8N8G6 183 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TMEM229BQ8NBD8 167 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 INO80EQ8NBZ0 244 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 C17orf47Q8NEP4 570 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TMEM185AQ8NFB2 350 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 BBS1Q8NFJ9 593 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR2L5Q8NG80 312 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR4C16Q8NGL9 310 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR2A12Q8NGT7 310 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR5J2Q8NH18 312 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR8K3Q8NH51 312 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR5K2Q8NHB8 316 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 STOML3Q8TAV4 291 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SYNPRQ8TBG9 265 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 WFDC5Q8TCV5 224 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 GPR148Q8TDV2 347 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 GLYATL2Q8WU03 294 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 CDS1Q92903 461 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ARL11Q969Q4 196 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PTX4Q96A99 478 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 BPIFA2Q96DR5 249 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SLC25A38Q96DW6 304 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 NUS1Q96E22 293 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PELI1Q96FA3 418 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 DTD2Q96FN9 168 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PRAP1Q96NZ9 151 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 STACQ99469 402 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TBX5Q99593 518 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF559Q9BR84 538 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF251Q9BRH9 671 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 RSPO3Q9BXY4 272 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF350Q9GZX5 532 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 COMMD4Q9H0A8 199 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 OR52A5Q9H2C5 316 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 EXO5Q9H790 373 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 AUNIPQ9H7T9 357 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 RNF122Q9H9V4 155 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TMEM27Q9HBJ8 222 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 APMAPQ9HDC9 416 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 FANCFQ9NPI8 374 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PRSS16Q9NQE7 514 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 EXOSC3Q9NQT5 275 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 MMP26Q9NRE1 261 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.18□□□□□ -2.06
VPS41-206ENST00000418457 GPR173Q9NS66 373 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 CA10Q9NS85 328 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MYEF2Q9P2K5 600 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 CTSFQ9UBX1 484 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF629Q9UEG4 869 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 CD84Q9UIB8 345 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ZNF223Q9UK11 482 aaPredicted RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 MRTO4Q9UKD2 239 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 TNFSF18Q9UNG2 199 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 FLVCR2Q9UPI3 526 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MOKQ9UQ07 419 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ERVK-19Q9WJR5 959 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 SIGLEC7Q9Y286 467 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 ASF1AQ9Y294 204 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 WDR45Q9Y484 360 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 TMEM14AQ9Y6G1 99 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 DOCK3Q8IZD9 2030 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 PCNX3Q9H6A9 2034 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 RANBP2P49792 3224 aaKnown RBP2.18□□□□□ -2.06
VPS41-206ENST00000418457 UNC80Q8N2C7 3258 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 MYO10Q9HD67 2058 aa2.18□□□□□ -2.06
VPS41-206ENST00000418457 LAMA3Q16787 3333 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 LRRK1Q38SD2 2015 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SCN2AQ99250 2005 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 A0A0B4J2A0 478 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 A4D1N5 150 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 LRIT2A6NDA9 550 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR5H14A6NHG9 310 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 FAM74A7A6NL05 159 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 FAM183AA6NL82 134 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR2AT4A6NND4 320 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 C1orf196B1AJZ1 125 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 EPM2AB3EWF7 344 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 LGALS8O00214 317 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SLC33A1O00400 549 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 CDC42EP2O14613 210 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TAAR5O14804 337 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SIGLEC5O15389 551 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF254O75437 659 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CLN5O75503 358 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 GLCEO94923 617 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 NXPH4O95158 308 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SLC2A10O95528 541 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 APBB3O95704 486 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 AIFM1O95831 613 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 RLN2P04090 185 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 THY1P04216 161 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CD74P04233 296 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 FABP1P07148 127 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CTSLP07711 333 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR4E1P0C645 316 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SLC35G4P0C7Q5 338 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 GTF2F2P13984 249 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CDK2P24941 298 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 GABRR2P28476 465 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms