RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TXLNGQ9NUQ3 528 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ING4Q9UNL4 249 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 PRELID1Q9Y255 219 aa2.02□□□□□ -2.09
MCF2-204ENST00000414978 ZNF256Q9Y2P7 627 aaPredicted RBP2.02□□□□□ -2.09
MCF2-204ENST00000414978 SPTY2D1-AS1A0A0U1RR47 76 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 IQCMA0A1B0GVH7 501 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 C15orf65H3BRN8 121 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 INSIG1O15503 277 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 AQP9O43315 295 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 SNAP91O60641 907 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FKBP6O75344 327 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FOXN2P32314 431 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CSKP41240 450 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 MAP3K8P41279 467 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 PFN3P60673 137 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 LMO4P61968 165 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FZD2Q14332 565 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 PRMT9Q6P2P2 845 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ZNF620Q6ZNG0 422 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 DCAF4L2Q8NA75 395 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ZNF740Q8NDX6 193 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 OR5AR1Q8NGP9 310 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 RAD51AP1Q96B01 352 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 TMEM80Q96HE8 168 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 JSRP1Q96MG2 331 aaPredicted RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 CHCHD5Q9BSY4 110 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 NUDT9Q9BW91 350 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 RPF2Q9H7B2 306 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 FGF22Q9HCT0 170 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 MYRFQ9Y2G1 1151 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ARL2BPQ9Y2Y0 163 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 GOLT1BQ9Y3E0 138 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FADS3Q9Y5Q0 445 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 LOC285095A0A1B0GVY8 99 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ZNF705EA8MWA4 302 aaPredicted RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 PRSS44E7EML9 344 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 SIRPB1O00241 398 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 MRPS12O15235 138 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 BIRC5O15392 142 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 EDF1O60869 148 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 AMBPP02760 352 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 THRAP10827 490 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 LAMP1P11279 417 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 BGNP21810 368 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ALDH3A1P30838 453 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 DRD3P35462 400 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 EMDP50402 254 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 SUB1P53999 127 aaKnown RBP eCLIP2.01□□□□□ -2.09
MCF2-204ENST00000414978 STXBP1P61764 594 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 MRPS11P82912 194 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 PSG5Q15238 335 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 C9orf64Q5T6V5 341 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 TMEM215Q68D42 235 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 LINC00173Q6ZV60 143 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 SSX9Q7RTT3 188 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 PLCZ1Q86YW0 608 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CYP4Z2PQ8N1L4 340 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 OR10G7Q8NGN6 311 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FAM222BQ8WU58 562 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 APH1BQ8WW43 257 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 NSMCE3Q96MG7 304 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 SLC35A5Q9BS91 424 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 OR51B6Q9H340 312 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 TAS2R7Q9NYW3 318 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FBXO5Q9UKT4 447 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ZNF337Q9Y3M9 751 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CACNG2Q9Y698 323 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 TDRD6O60522 2096 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 PCNX1Q96RV3 2341 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 NF1P21359 2839 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CENPXA8MT69 81 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 A8MX80 341 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 K7EQG2 157 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CCL21O00585 134 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 PFDN6O15212 129 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ATP6V1G2O95670 118 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CATP04040 527 aaKnown RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 BPGMP07738 259 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 PIRTP0C851 137 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CD37P11049 281 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FOLR1P15328 257 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 MAGP20916 626 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CRABP2P29373 138 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 UBE2E1P51965 193 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 AP1S1P61966 158 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CCL7P80098 99 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 IHHQ14623 411 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 TAF1AQ15573 450 aaPredicted RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 CCDC153Q494R4 210 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 LCE4AQ5TA78 99 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 UFSP1Q6NVU6 142 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 Q6ZS92 163 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 GLT6D1Q7Z4J2 308 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 SMIM29Q86T20 159 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 HORMAD1Q86X24 394 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 CARM1Q86X55 608 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 FNDC8Q8TC99 324 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 LGALS14Q8TCE9 139 aa2.01□□□□□ -2.09
MCF2-204ENST00000414978 ZNF501Q96CX3 271 aaPredicted RBP2.01□□□□□ -2.09
MCF2-204ENST00000414978 UBE2E2Q96LR5 201 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms