RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 WDR83OSQ9Y284 106 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 OR51B2Q9Y5P1 312 aa3.09□□□□□ -1.91
SF3B1-203ENST00000414174 HFM1A2PYH4 1435 aa3.09□□□□□ -1.92
SF3B1-203ENST00000414174 KDM6AO15550 1401 aaPredicted RBP3.09□□□□□ -1.92
SF3B1-203ENST00000414174 SSH2Q76I76 1423 aa3.09□□□□□ -1.92
SF3B1-203ENST00000414174 PRAMEF33A0A0G2JMD5 474 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 A0A0G2JN53 185 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PNMA8CA0A1B0GUJ8 204 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TMEM269A0A1B0GVZ9 245 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CEACAM18A8MTB9 384 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 FOXI3A8MTJ6 420 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TRIM49D1C9J1S8 452 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 FAM157AC9JC47 383 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 F5H5K5 113 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 H3BMH7 237 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 J3KR12 359 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 FABP7O15540 132 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HOXA3O43365 443 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HCRTR1O43613 425 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 SNX3O60493 162 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 MRPS14O60783 128 aaKnown RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PRAMEF10O60809 474 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 FKBP6O75344 327 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 UPK1BO75841 260 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 ATP5LO75964 103 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CLIC3O95833 236 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 LALBAP00709 142 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CD8AP01732 235 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HBE1P02100 147 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 APOA2P02652 100 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CELA2AP08217 269 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 EVI2AP22794 236 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CDK2P24941 298 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 SRIP30626 198 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CHRNB4P30926 498 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HOXD3P31249 432 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HRH1P35367 487 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 GLRXP35754 106 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TSFMP43897 325 aaKnown RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 AVPR1BP47901 424 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 AMTP48728 403 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PDX1P52945 283 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HCCSP53701 268 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 IFITM3Q01628 133 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 DUSP2Q05923 314 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PPP1R1AQ13522 171 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 FZD2Q14332 565 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 JOSD1Q15040 202 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 P2RY6Q15077 328 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 IAH1Q2TAA2 248 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 ACOT6Q3I5F7 207 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 C1orf195Q5TG92 126 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HBMQ6B0K9 141 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 LCN10Q6JVE6 187 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TNFAIP8L2Q6P589 184 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 RASSF6Q6ZTQ3 369 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF534Q76KX8 674 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 BCDIN3DQ7Z5W3 292 aaKnown RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CMC1Q7Z7K0 106 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PIGZQ86VD9 579 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 IFNEQ86WN2 208 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR4N5Q8IXE1 308 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR8I2Q8N0Y5 310 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CFAP52Q8N1V2 620 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 GPD1LQ8N335 351 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TPRX1Q8N7U7 411 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 C15orf54Q8N8G6 183 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 WDR31Q8NA23 367 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 THAP8Q8NA92 274 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 ADAD2Q8NCV1 583 aaKnown RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR4S1Q8NGB4 309 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR5A1Q8NGJ0 315 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR2K2Q8NGT1 345 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR2G2Q8NGZ5 317 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR5W2Q8NH69 310 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 SLC25A43Q8WUT9 341 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 GATAD1Q8WUU5 269 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TMED6Q8WW62 240 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 DCUN1D4Q92564 292 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 FGGYQ96C11 551 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 GPR146Q96CH1 333 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 DIRAS2Q96HU8 199 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 SLC35E1Q96K37 410 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 IL17FQ96PD4 163 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 SIGLEC12Q96PQ1 595 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 NEDD4LQ96PU5 975 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 RNF157Q96PX1 679 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 OR52B2Q96RD2 323 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 CLCC1Q96S66 551 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 MGLLQ99685 303 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 SLC25A33Q9BSK2 321 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 RPP25Q9BUL9 199 aaKnown RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 GATA5Q9BWX5 397 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TEX101Q9BY14 249 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PITPNM3Q9BZ71 974 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 SLC29A3Q9BZD2 475 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PRRG4Q9BZD6 226 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 NANOGQ9H9S0 305 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 NAT8Q9UHE5 227 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms