RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FOXL2NBQ6ZUU3 175 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 ZNF565Q8N9K5 539 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 RTN4IP1Q8WWV3 396 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-202ENST00000413219 NTNG2Q96CW9 530 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 YPEL4Q96NS1 127 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 HDHD3Q9BSH5 251 aaPredicted RBP15.39■□□□□ 0.05
SDCBP-202ENST00000413219 ANGPTL4Q9BY76 406 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 LIME1Q9H400 295 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 FGF21Q9NSA1 209 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 PIGLQ9Y2B2 252 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 NSG1A0A0A6YYJ2 146 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 IGHV1OR15-9A0A0B4J2B8 117 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 TRBV11-1A0A0K0K1C0 115 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 K7N7A8 449 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 MSTNO14793 375 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 ST8SIA3O43173 380 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 DMRTC1Q5HYR2 192 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 C10orf128Q5T292 105 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 LGI3Q8N145 548 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 OR8G5Q8NG78 346 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 OR2M3Q8NG83 312 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 CD300LFQ8TDQ1 290 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 PIGTQ969N2 578 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 METTL9Q9H1A3 318 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 NKX2-4Q9H2Z4 354 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 ZDHHC8Q9ULC8 765 aa15.39■□□□□ 0.05
SDCBP-202ENST00000413219 DNAH14Q0VDD8 3507 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 SEC16AO15027 2179 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 A0A1W2PPE2 198 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 TXNL1O43396 289 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 PPIHO43447 177 aaKnown RBP15.38■□□□□ 0.05
SDCBP-202ENST00000413219 FHITP49789 147 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 CLEC9AQ6UXN8 241 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 Q6ZS52 159 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.38■□□□□ 0.05
SDCBP-202ENST00000413219 LYZL2Q7Z4W2 148 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 RLN3Q8WXF3 142 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 SPSB1Q96BD6 273 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 MESP1Q9BRJ9 268 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 CHRDQ9H2X0 955 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 NELFAQ9H3P2 528 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 METTL7AQ9H8H3 244 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 KNL1Q8NG31 2342 aa15.38■□□□□ 0.05
SDCBP-202ENST00000413219 ZNF850A8MQ14 1090 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 GATCO43716 136 aaKnown RBP15.37■□□□□ 0.05
SDCBP-202ENST00000413219 RAMP1O60894 148 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 ARG1P05089 322 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 HEXBP07686 556 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 FBP1P09467 338 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 UCP3P55916 312 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 ENDOGQ14249 297 aaKnown RBP15.37■□□□□ 0.05
SDCBP-202ENST00000413219 HEPN1Q6WQI6 88 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 FBXW12Q6X9E4 464 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 SLC22A8Q8TCC7 542 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 TOMM40LQ969M1 308 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 SYT3Q9BQG1 590 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 RSRP1Q9BUV0 290 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 UNKLQ9H9P5 680 aaKnown RBP15.37■□□□□ 0.05
SDCBP-202ENST00000413219 AK3Q9UIJ7 227 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 FBXO7Q9Y3I1 522 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 F5H5K5 113 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 DIRAS3O95661 229 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 OPN1LWP04000 364 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 RPS23P62266 143 aaKnown RBP15.37■□□□□ 0.05
SDCBP-202ENST00000413219 SP6Q3SY56 376 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 IGSF11Q5DX21 431 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 SOHLH1Q5JUK2 328 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 RHBDD2Q6NTF9 364 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 MSI2Q96DH6 328 aaKnown RBP15.37■□□□□ 0.05
SDCBP-202ENST00000413219 SH3BGRL3Q9H299 93 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 TMED3Q9Y3Q3 217 aa15.37■□□□□ 0.05
SDCBP-202ENST00000413219 XRCC2O43543 280 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 OR2C1O95371 312 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 CSNK1A1P48729 337 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 CLDN17P56750 224 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 FOXL2P58012 376 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 OR2B8PP59922 312 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 SUMF2Q8NBJ7 301 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 EDARADDQ8WWZ3 215 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 TMEM54Q969K7 222 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 FAAP24Q9BTP7 215 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 BTBD17A6NE02 478 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 METTL12A8MUP2 240 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 WRBO00258 174 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 C1QL1O75973 258 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 HOXA5P20719 270 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 RSPO1Q2MKA7 263 aaPredicted RBP15.36■□□□□ 0.05
SDCBP-202ENST00000413219 ACER2Q5QJU3 275 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 SYT13Q7L8C5 426 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 RABEPKQ7Z6M1 372 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 DTX1Q86Y01 620 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 HSD17B11Q8NBQ5 300 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 FAM213BQ8TBF2 198 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 SLC2A9Q9NRM0 540 aa15.36■□□□□ 0.05
SDCBP-202ENST00000413219 FER1L5A0AVI2 2057 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 OR5H15A6NDH6 313 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 M0R135 149 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 OR13C7P0DN81 318 aa15.35■□□□□ 0.05
SDCBP-202ENST00000413219 PPP1CCP36873 323 aaKnown RBP15.35■□□□□ 0.05
SDCBP-202ENST00000413219 HTR5AP47898 357 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms