RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 RFT1Q96AA3 541 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 TM2D1Q9BX74 207 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 CACNG6Q9BXT2 260 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 CXorf56Q9H5V9 222 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 DLL4Q9NR61 685 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 MTCH1Q9NZJ7 389 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 RABL2AQ9UBK7 228 aaPredicted RBP17.08■□□□□ 0.32
PTPA-208ENST00000411917 ADAM30Q9UKF2 790 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 RABL2BQ9UNT1 228 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 PLEKHA6Q9Y2H5 1048 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 NPTNQ9Y639 398 aa17.08■□□□□ 0.32
PTPA-208ENST00000411917 FASNP49327 2511 aaKnown RBP17.07■□□□□ 0.32
PTPA-208ENST00000411917 ARFGEF3Q5TH69 2177 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 LRRC30A6NM36 301 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 SRRM5B3KS81 715 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 TPD52L2O43399 206 aaKnown RBP17.07■□□□□ 0.32
PTPA-208ENST00000411917 SYNGR1O43759 233 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 GRPP07492 148 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 GTF2F2P13984 249 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 FGF12P61328 243 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 CCL8P80075 99 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 P2RY14Q15391 338 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 MPPED2Q15777 294 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 UBE2NLQ5JXB2 153 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 PRAMEF6Q5VXH4 476 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 LRRC28Q86X40 367 aaPredicted RBP17.07■□□□□ 0.32
PTPA-208ENST00000411917 C1orf87Q8N0U7 546 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 OR5D18Q8NGL1 313 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 MARVELD3Q96A59 401 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 MYOZ1Q9NP98 299 aaPredicted RBP17.07■□□□□ 0.32
PTPA-208ENST00000411917 PPP1R3CQ9UQK1 317 aa17.07■□□□□ 0.32
PTPA-208ENST00000411917 TMEM272A0A1B0GTI8 110 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 A6NLC8 198 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 SPRY1O43609 319 aaPredicted RBP17.06■□□□□ 0.32
PTPA-208ENST00000411917 CSTBP04080 98 aaKnown RBP17.06■□□□□ 0.32
PTPA-208ENST00000411917 SNRPBP14678 240 aaKnown RBP17.06■□□□□ 0.32
PTPA-208ENST00000411917 CLDN12P56749 244 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 UNC119Q13432 240 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 IL13RA2Q14627 380 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 FAM89BQ8N5H3 189 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 URM1Q9BTM9 101 aaKnown RBP17.06■□□□□ 0.32
PTPA-208ENST00000411917 IFT22Q9H7X7 185 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 ZNF701Q9NV72 531 aaPredicted RBP17.06■□□□□ 0.32
PTPA-208ENST00000411917 C1orf123Q9NWV4 160 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 RNF7Q9UBF6 113 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 ING4Q9UNL4 249 aa17.06■□□□□ 0.32
PTPA-208ENST00000411917 CDC14BO60729 498 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 RHBDL1O75783 438 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 PAHP00439 452 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 SFTPBP07988 381 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 ETV6P41212 452 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 ART1P52961 327 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 RPS27AP62979 156 aaKnown RBP17.05■□□□□ 0.32
PTPA-208ENST00000411917 ZNF146Q15072 292 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 SPIN3Q5JUX0 258 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 RAB12Q6IQ22 244 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 MOGAT3Q86VF5 341 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 OSR2Q8N2R0 312 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 OR6Q1Q8NGQ2 317 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 RDH5Q92781 318 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 SLC25A38Q96DW6 304 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 Q96M66 194 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 CCL19Q99731 98 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 TMEM59Q9BXS4 323 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 HMG20AQ9NP66 347 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 RHBDL2Q9NX52 303 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 DCHS2Q6V1P9 2916 aa17.05■□□□□ 0.32
PTPA-208ENST00000411917 IGHV1-69-2A0A0G2JMI3 117 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 METTL21EPA6NDL7 271 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 ANGPTL7O43827 346 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 F12P00748 615 aaPredicted RBP17.04■□□□□ 0.32
PTPA-208ENST00000411917 CHRM2P08172 466 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 IRF2P14316 349 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 MGMTP16455 207 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 CPT2P23786 658 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 S100A5P33763 92 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 PMELP40967 661 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 MNDAP41218 407 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 EFNA4P52798 201 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 MPV17LQ2QL34 196 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 SMIM21Q3B7S5 101 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 SLC22A6Q4U2R8 563 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 FIP1L1Q6UN15 594 aaKnown RBP17.04■□□□□ 0.32
PTPA-208ENST00000411917 GCSAMQ8N6F7 178 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 SLAMF9Q96A28 289 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 VRK1Q99986 396 aaPredicted RBP17.04■□□□□ 0.32
PTPA-208ENST00000411917 C6orf62Q9GZU0 229 aaPredicted RBP17.04■□□□□ 0.32
PTPA-208ENST00000411917 COMMD3Q9UBI1 195 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 DOPEY2Q9Y3R5 2298 aa17.04■□□□□ 0.32
PTPA-208ENST00000411917 UTP20O75691 2785 aaKnown RBP17.03■□□□□ 0.32
PTPA-208ENST00000411917 A0A0B4J203 849 aa17.03■□□□□ 0.32
PTPA-208ENST00000411917 KNG1P01042 644 aa17.03■□□□□ 0.32
PTPA-208ENST00000411917 HPXP02790 462 aa17.03■□□□□ 0.32
PTPA-208ENST00000411917 BCL3P20749 454 aa17.03■□□□□ 0.32
PTPA-208ENST00000411917 PTBP1P26599 531 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPA-208ENST00000411917 COL8A1P27658 744 aa17.03■□□□□ 0.32
PTPA-208ENST00000411917 RBM11P57052 281 aaKnown RBP17.03■□□□□ 0.32
PTPA-208ENST00000411917 ARL6IP1Q15041 203 aa17.03■□□□□ 0.32
PTPA-208ENST00000411917 SPRNQ5BIV9 151 aa17.03■□□□□ 0.32
PTPA-208ENST00000411917 TEX36Q5VZQ5 186 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms