RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 PKIBQ9C010 78 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 ZMAT3Q9HA38 289 aaKnown RBP15.63■□□□□ 0.09
SF3A1-202ENST00000411423 PLEKHA1Q9HB21 404 aa15.63■□□□□ 0.09
SF3A1-202ENST00000411423 OR4C45A6NMZ5 311 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 WBP4O75554 376 aaKnown RBP15.62■□□□□ 0.09
SF3A1-202ENST00000411423 INMTO95050 263 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 NXPH2O95156 264 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 CLIC3O95833 236 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 GALEQ14376 348 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 SMIM21Q3B7S5 101 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 LPCAT4Q643R3 524 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 CRIP3Q6Q6R5 217 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 OR52I1Q8NGK6 324 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 ZDHHC16Q969W1 377 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 SLAMF9Q96A28 289 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 SLC25A28Q96A46 364 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 FGGYQ96C11 551 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 DMRTB1Q96MA1 342 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 ADI1Q9BV57 179 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 ALG8Q9BVK2 526 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 IL36RNQ9UBH0 155 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 POLDIP2Q9Y2S7 368 aa15.62■□□□□ 0.09
SF3A1-202ENST00000411423 ISG15P05161 165 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 HTR1AP08908 422 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 FUT6P51993 359 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 ERVFRD-1P60508 538 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 TMEM244Q5VVB8 128 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 C16orf87Q6PH81 154 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 METAP1DQ6UB28 335 aaPredicted RBP15.61■□□□□ 0.09
SF3A1-202ENST00000411423 KCTD20Q7Z5Y7 419 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 CCDC54Q8NEL0 328 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 CHIAQ9BZP6 476 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 NOX4Q9NPH5 578 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 MRPS18AQ9NVS2 196 aaKnown RBP15.61■□□□□ 0.09
SF3A1-202ENST00000411423 ERVK13-1Q9NX77 482 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 OR14J1Q9UGF5 321 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 SLC7A11Q9UPY5 501 aa15.61■□□□□ 0.09
SF3A1-202ENST00000411423 A0A1W2PQ09 198 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 ANKRD65E5RJM6 399 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 IGHV4-59P01825 116 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 OMGP23515 440 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 CCR9P51686 369 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 ALKBH1Q13686 389 aaKnown RBP15.6■□□□□ 0.09
SF3A1-202ENST00000411423 ZSCAN26Q16670 478 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 LRRC36Q1X8D7 754 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 FAM185AQ8N0U4 392 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 C11orf42Q8N5U0 333 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 C3orf56Q8N813 242 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 OR4M1Q8NGD0 313 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 C10orf35Q96D05 121 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 SMPD3Q9NY59 655 aaPredicted RBP15.6■□□□□ 0.09
SF3A1-202ENST00000411423 PCDHGB1Q9Y5G3 927 aa15.6■□□□□ 0.09
SF3A1-202ENST00000411423 FAM181BA6NEQ2 426 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 M0R1W7 72 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 MPZL2O60487 215 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 GATBO75879 557 aaKnown RBP15.59■□□□□ 0.09
SF3A1-202ENST00000411423 CALCBP10092 127 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 ATF1P18846 271 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 NPBWR2P48146 333 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 CAPZA1P52907 286 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 RELBQ01201 579 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 FIP1L1Q6UN15 594 aaKnown RBP15.59■□□□□ 0.09
SF3A1-202ENST00000411423 SLC25A26Q70HW3 274 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 CMTM4Q8IZR5 234 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 ZNF561Q8N587 486 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 CNIH3Q8TBE1 160 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 C17orf50Q8WW18 174 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 PP6455Q8WZ26 134 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 BORCS8Q96FH0 119 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 CEP19Q96LK0 163 aa15.59■□□□□ 0.09
SF3A1-202ENST00000411423 SNTNA6NMZ2 147 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 NPFFO15130 113 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 KNG1P01042 644 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 TK1P04183 234 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 LIMS3P0CW19 117 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 LIMS4P0CW20 117 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 CCL3L1P16619 93 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 MDKP21741 143 aaPredicted RBP15.58■□□□□ 0.08
SF3A1-202ENST00000411423 AZGP1P25311 298 aaKnown RBP15.58■□□□□ 0.08
SF3A1-202ENST00000411423 PEX2P28328 305 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 ACTA2P62736 377 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 ACTG2P63267 376 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 COL10A1Q03692 680 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 RAB40BQ12829 278 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 FOXL1Q12952 345 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF273Q14593 569 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 ZNF691Q5VV52 312 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 TMEM200BQ69YZ2 307 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 XAF1Q6GPH4 301 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 C1orf122Q6ZSJ8 110 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 UTS2BQ765I0 119 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 LDLRAD3Q86YD5 345 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 SYS1Q8N2H4 156 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 STMN2Q93045 179 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 RFT1Q96AA3 541 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 AJUBAQ96IF1 538 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 Q96MT0 163 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 SPACA5Q96QH8 159 aa15.58■□□□□ 0.08
SF3A1-202ENST00000411423 UNKLQ9H9P5 680 aaKnown RBP15.58■□□□□ 0.08
SF3A1-202ENST00000411423 RBFOX1Q9NWB1 397 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms