RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 OR5D18Q8NGL1 313 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 OR10R2Q8NGX6 335 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 SLC25A40Q8TBP6 338 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 OR5P3Q8WZ94 311 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 PHF21AQ96BD5 680 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 NICN1Q9BSH3 213 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 PAPOLGQ9BWT3 736 aaKnown RBP4.73□□□□□ -1.65
EPHA4-202ENST00000409854 BCL2L14Q9BZR8 327 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 MYEF2Q9P2K5 600 aaKnown RBP4.73□□□□□ -1.65
EPHA4-202ENST00000409854 ZNF107Q9UII5 783 aaPredicted RBP4.73□□□□□ -1.65
EPHA4-202ENST00000409854 CHD3Q12873 2000 aaKnown RBP4.73□□□□□ -1.65
EPHA4-202ENST00000409854 IGKV1-12A0A0C4DH73 117 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 LILRA1O75019 489 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 ZNF780AO75290 641 aaPredicted RBP4.73□□□□□ -1.65
EPHA4-202ENST00000409854 IGKV1D-12P01611 117 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 LPLP06858 475 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 MGMTP16455 207 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 SELEP16581 610 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 KITLGP21583 273 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 PRSS3P35030 304 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 RAD52P43351 418 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 ERVS71-1P61550 626 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 NAAAQ02083 359 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 PLA1AQ53H76 456 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 MBNL2Q5VZF2 373 aaKnown RBP4.73□□□□□ -1.65
EPHA4-202ENST00000409854 SSX8Q7RTT4 187 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 ACBD4Q8NC06 268 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 OR5T2Q8NGG2 359 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 OR56B1Q8NGI3 324 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 OR1J1Q8NGS3 322 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 SEH1LQ96EE3 360 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 POM121Q96HA1 1249 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 Q96M66 194 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 URM1Q9BTM9 101 aaKnown RBP4.73□□□□□ -1.65
EPHA4-202ENST00000409854 OR2J1Q9GZK6 312 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 ACTR6Q9GZN1 396 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 METTL9Q9H1A3 318 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 KLK11Q9UBX7 282 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 ANAPC10Q9UM13 185 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 ING4Q9UNL4 249 aa4.73□□□□□ -1.65
EPHA4-202ENST00000409854 NAP1L6A6NFF2 107 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 PCP4L1A6NKN8 68 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 OR5B21A6NL26 309 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 ANKRD30BLA7E2S9 258 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 MFNGO00587 321 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 AKR7A2O43488 359 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CIDEAO60543 219 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 MPIG6BO95866 241 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 GSTP1P09211 210 aaKnown RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 TRAPPC2P0DI81 140 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 TRAPPC2BP0DI82 140 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 PCP4P48539 62 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 TMEM50BP56557 158 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 AP3S2P59780 193 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 GUCA2AQ02747 115 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 SLC22A6Q4U2R8 563 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 RNASE12Q5GAN4 147 aaKnown RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 TMEM200AQ86VY9 491 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CALHM1Q8IU99 346 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 RND1Q92730 232 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CMBLQ96DG6 245 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 MRPS24Q96EL2 167 aaKnown RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 BANF2Q9H503 90 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 TAS2R8Q9NYW2 309 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 POU2F3Q9UKI9 436 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 NOP16Q9Y3C1 178 aaKnown RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 HEATR1Q9H583 2144 aaKnown RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 IGF2RP11717 2491 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 HCFC1P51610 2035 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 TMEM82A0PJX8 343 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 HMX3A6NHT5 357 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 EEF1E1-BLOC1S5C9J1V9 151 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 SPRY1O43609 319 aaPredicted RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CA11O75493 328 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CSF1P09603 554 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 TMEM225BP0DP42 221 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 HIST1H1DP16402 221 aaKnown RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CPT2P23786 658 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 MPZP25189 248 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 VEGFCP49767 419 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 ACTBP60709 375 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 ACTG1P63261 375 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 FAM27E3Q08E93 113 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 PSG7Q13046 419 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 PNLIPRP3Q17RR3 467 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 PLAC9Q5JTB6 97 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 SPATA46Q5T0L3 261 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 OR2T2Q6IF00 324 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 MTFR2Q6P444 385 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CELF2-AS1Q8N7Q2 184 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 LRRC20Q8TCA0 184 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 KLF14Q8TD94 323 aaPredicted RBP4.72□□□□□ -1.65
EPHA4-202ENST00000409854 S100A13Q99584 98 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 MARVELD1Q9BSK0 173 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 C1QTNF6Q9BXI9 259 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 OR51B6Q9H340 312 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 NARFLQ9H6Q4 476 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 HRASLSQ9HDD0 168 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 KCNK7Q9Y2U2 307 aa4.72□□□□□ -1.65
EPHA4-202ENST00000409854 CENPXA8MT69 81 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms