RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 TMEM108Q6UXF1 575 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 TMEM200AQ86VY9 491 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 LRP11Q86VZ4 500 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 RADILQ96JH8 1075 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 WFIKKN1Q96NZ8 548 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 SPEF1Q9Y4P9 236 aa11.98□□□□□ -0.49
GPNMB-203ENST00000409458 LRP5LA4QPB2 252 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 DPRXA6NFQ7 191 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 RHBDL1O75783 438 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 ZNF250P15622 560 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 MPZP25189 248 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 GIFP27352 417 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 CCR6P51684 374 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 RBM11P57052 281 aaKnown RBP11.97□□□□□ -0.49
GPNMB-203ENST00000409458 GNG2P59768 71 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 IL24Q13007 206 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 DAZAP2Q15038 168 aaPredicted RBP11.97□□□□□ -0.49
GPNMB-203ENST00000409458 CDSNQ15517 529 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 FBXL19-AS1Q494R0 122 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 NKAPLQ5M9Q1 402 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 MKXQ8IYA7 352 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 CADM3Q8N126 398 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 GVQW1Q8N7I0 195 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 Q8NFD4 153 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 OR4D10Q8NGI6 311 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 TMEM171Q8WVE6 324 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 ST8SIA4Q92187 359 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 MRPS24Q96EL2 167 aaKnown RBP11.97□□□□□ -0.49
GPNMB-203ENST00000409458 ZNF488Q96MN9 340 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 HS3ST6Q96QI5 342 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 PKIBQ9C010 78 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 DPAGT1Q9H3H5 408 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 MSL2Q9HCI7 577 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.97□□□□□ -0.49
GPNMB-203ENST00000409458 TAS2R8Q9NYW2 309 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 COQ3Q9NZJ6 369 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 ST3GAL6Q9Y274 331 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 IGHV3-64DA0A0J9YX35 117 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 NAP1L6A6NFF2 107 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 J3QT63 122 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 AKR7A2O43488 359 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 CYB5AP00167 134 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 PPP3CBP16298 524 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 BSPH1Q075Z2 132 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 ZNF154Q13106 437 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 SNTB1Q13884 538 aaKnown RBP11.97□□□□□ -0.49
GPNMB-203ENST00000409458 PNLIPRP3Q17RR3 467 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 ELP2Q6IA86 826 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 SSX8Q7RTT4 187 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 C6orf201Q7Z4U5 140 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 OR4C16Q8NGL9 310 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 GTF3AQ92664 365 aaKnown RBP11.97□□□□□ -0.49
GPNMB-203ENST00000409458 SYT3Q9BQG1 590 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 PCDHB16Q9NRJ7 776 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 MCUBQ9NWR8 336 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 IL36RNQ9UBH0 155 aa11.97□□□□□ -0.49
GPNMB-203ENST00000409458 RELNP78509 3460 aa11.96□□□□□ -0.49
GPNMB-203ENST00000409458 A0A0B4J293 547 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 C3orf80F5H4A9 247 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 F5H5P2 479 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 TRAPPC2LH3BP13 241 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 ABCD4O14678 606 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 CD3DP04234 171 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 AKAIN1P0CW23 69 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 PTAFRP25105 342 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 GRNP28799 593 aaKnown RBP11.96□□□□□ -0.5
GPNMB-203ENST00000409458 RCVRNP35243 200 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 SNU13P55769 128 aaKnown RBP11.96□□□□□ -0.5
GPNMB-203ENST00000409458 TAS2R19P59542 299 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 FGF12P61328 243 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 RPS23P62266 143 aaKnown RBP11.96□□□□□ -0.5
GPNMB-203ENST00000409458 PDCD1Q15116 288 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 RSBN1Q5VWQ0 802 aaPredicted RBP11.96□□□□□ -0.5
GPNMB-203ENST00000409458 TMEM229BQ8NBD8 167 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 NUP37Q8NFH4 326 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 OR4S1Q8NGB4 309 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 LILRB4Q8NHJ6 448 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 RNASE6Q93091 150 aaKnown RBP11.96□□□□□ -0.5
GPNMB-203ENST00000409458 CACNG6Q9BXT2 260 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 IFT46Q9NQC8 304 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 DUSP13Q9UII6 198 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 ANAPC10Q9UM13 185 aa11.96□□□□□ -0.5
GPNMB-203ENST00000409458 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 IGLV3-9A0A075B6K5 115 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.95□□□□□ -0.5
GPNMB-203ENST00000409458 A0A1B0GWJ7 208 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 TMEM210A6NLX4 147 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 PFDN1O60925 122 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 IGHV3-13P01766 116 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 HLA-DMAP28067 261 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 CHATP28329 748 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 UQCRFS1P47985 274 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 KLF3P57682 345 aaPredicted RBP11.95□□□□□ -0.5
GPNMB-203ENST00000409458 SFRP4Q6FHJ7 346 aaPredicted RBP11.95□□□□□ -0.5
GPNMB-203ENST00000409458 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 DEDD2Q8WXF8 326 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 CREB3L1Q96BA8 519 aa11.95□□□□□ -0.5
GPNMB-203ENST00000409458 MARVELD1Q9BSK0 173 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms