RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 GLIPR1L1Q6UWM5 242 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 ZNF765Q7L2R6 523 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 GBGT1Q8N5D6 347 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 OR52N5Q8NH56 324 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 TMEM170AQ8WVE7 144 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 SOCS4Q8WXH5 440 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 NUDT16L1Q9BRJ7 211 aaKnown RBP11.23□□□□□ -0.61
HERC3-203ENST00000407637 LMF2Q9BU23 707 aaKnown RBP11.23□□□□□ -0.61
HERC3-203ENST00000407637 LAMA2P24043 3122 aaKnown RBP11.23□□□□□ -0.61
HERC3-203ENST00000407637 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 B3GALT2O43825 422 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 MPZL1O95297 269 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 UMODP07911 640 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 OMGP23515 440 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 CST5P28325 142 aaPredicted RBP11.23□□□□□ -0.61
HERC3-203ENST00000407637 TAS2R46P59540 309 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 DCAF7P61962 342 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 GABREP78334 506 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 RUNX1Q01196 453 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 LEMD1Q68G75 181 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 SP5Q6BEB4 398 aaPredicted RBP11.23□□□□□ -0.61
HERC3-203ENST00000407637 NUFIP2Q7Z417 695 aaKnown RBP11.23□□□□□ -0.61
HERC3-203ENST00000407637 LYZL2Q7Z4W2 148 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 ARRDC3Q96B67 414 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 MIEN1Q9BRT3 115 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 FOXQ1Q9C009 403 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 SDF2L1Q9HCN8 221 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 TET1Q8NFU7 2136 aa11.23□□□□□ -0.61
HERC3-203ENST00000407637 NXPH2O95156 264 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 H2BFMP0C1H6 154 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 GLI4P10075 376 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 CTLA4P16410 223 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 DPTQ07507 201 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 TDRG1Q3Y452 100 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 RTL6Q6ICC9 239 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 FBXW12Q6X9E4 464 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 PRSS41Q7RTY9 318 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 C16orf82Q7Z2V1 217 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 MAML2Q8IZL2 1156 aaPredicted RBP11.22□□□□□ -0.61
HERC3-203ENST00000407637 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
HERC3-203ENST00000407637 ZNF2Q9BSG1 426 aaPredicted RBP11.22□□□□□ -0.61
HERC3-203ENST00000407637 GPR84Q9NQS5 396 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 LRIT1Q9P2V4 623 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 LINC01553A4QN01 128 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 FAM24AA6NFZ4 105 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ZFP92A6NM28 416 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 CCL25O15444 150 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 CMPK1P30085 196 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ZNF93P35789 620 aaPredicted RBP11.22□□□□□ -0.61
HERC3-203ENST00000407637 OR3A4PP47883 348 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 FOXK1P85037 733 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 RNF151Q2KHN1 245 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 CHRFAM7AQ494W8 412 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 COL5A1-AS1Q5SY13 56 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 LINC00346Q8IVM7 164 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 FBXL14Q8N1E6 418 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 OR5L2Q8NGL0 311 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 COX14Q96I36 57 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 BOD1Q96IK1 185 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ADOQ96SZ5 270 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 TMEM59Q9BXS4 323 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 PCED1AQ9H1Q7 454 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ZNF581Q9P0T4 197 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 MRPS28Q9Y2Q9 187 aaKnown RBP11.22□□□□□ -0.61
HERC3-203ENST00000407637 PPIAL4AQ9Y536 164 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 A0A1B0GUS0 222 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 A0A1W2PRU2 124 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 C20orf202A1L168 122 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ISG15P05161 165 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 PFN1P07737 140 aaKnown RBP11.22□□□□□ -0.61
HERC3-203ENST00000407637 CD33P20138 364 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ZNF266Q14584 549 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 IL13RA2Q14627 380 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 TSPO2Q5TGU0 170 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ARMC6Q6NXE6 501 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
HERC3-203ENST00000407637 OR4C3Q8NH37 302 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 TMEM171Q8WVE6 324 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 PCGF1Q9BSM1 259 aa11.22□□□□□ -0.61
HERC3-203ENST00000407637 IGKV1D-8A0A087WSZ0 117 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 IGLV1-36A0A0B4J1U3 117 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 IGSF23A1L1A6 192 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 A8MXE2 369 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 ZNF878C9JN71 531 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 SFTPDP35247 375 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 SELENOTP62341 195 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 ZNF141Q15928 474 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 TOMM20LQ6UXN7 152 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 LIPHQ8WWY8 451 aa11.21□□□□□ -0.61
HERC3-203ENST00000407637 ALKBH3Q96Q83 286 aaPredicted RBP11.21□□□□□ -0.61
HERC3-203ENST00000407637 SERINC4A6NH21 518 aa11.21□□□□□ -0.62
HERC3-203ENST00000407637 SCDO00767 359 aa11.21□□□□□ -0.62
HERC3-203ENST00000407637 ST8SIA3O43173 380 aa11.21□□□□□ -0.62
HERC3-203ENST00000407637 CSF2RAP15509 400 aa11.21□□□□□ -0.62
HERC3-203ENST00000407637 PTTG1IPP53801 180 aa11.21□□□□□ -0.62
HERC3-203ENST00000407637 ADIRFQ15847 76 aa11.21□□□□□ -0.62
HERC3-203ENST00000407637 CPEB2Q7Z5Q1 589 aaKnown RBP11.21□□□□□ -0.62
HERC3-203ENST00000407637 CMTM1Q8IZ96 169 aa11.21□□□□□ -0.62
HERC3-203ENST00000407637 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms