RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FAM89BQ8N5H3 189 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 OR4D10Q8NGI6 311 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 OR51T1Q8NGJ9 327 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 OR4K15Q8NH41 348 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 SARAFQ96BY9 339 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 MS4A3Q96HJ5 214 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 GAL3ST1Q99999 423 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 SRXN1Q9BYN0 137 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 LINC00470Q9BZP3 86 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 TINAGL1Q9GZM7 467 aaPredicted RBP11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 SPRR3Q9UBC9 169 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 KCNN3Q9UGI6 736 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 OPN4Q9UHM6 478 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 AKAP6Q13023 2319 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 MED12Q93074 2177 aa11.2□□□□□ -0.62
SMARCB1-203ENST00000407082 DNHD1Q96M86 4753 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 NKX2-6A6NCS4 301 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 OR14I1A6ND48 311 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 RFPL4AA6NLU0 287 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 FAM90A27PA6NNH2 459 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF716A6NP11 495 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 RFPL4AL1F8VTS6 287 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 PRRG2O14669 202 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 XRCC2O43543 280 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 CXCL13O43927 109 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 NAT2P11245 290 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 OR3A3P47888 321 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 OR3A2P47893 321 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 STARP49675 285 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 RPS27AP62979 156 aaKnown RBP11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 GTF3C1Q12789 2109 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 GRK1Q15835 563 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 PHYHD1Q5SRE7 291 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 ATPAF1Q5TC12 328 aaPredicted RBP11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 NSUN5P2Q63ZY6 315 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 THOC7Q6I9Y2 204 aaKnown RBP11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 LHFPL2Q6ZUX7 228 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 SLC16A14Q7RTX9 510 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 TMED4Q7Z7H5 227 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 GGNQ86UU5 652 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 DOLPP1Q86YN1 238 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF100Q8IYN0 542 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 OR5H2Q8NGV7 314 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 OR10D3Q8NH80 312 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 ANGPTL6Q8NI99 470 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 ELMOD3Q96FG2 381 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 ADGRG7Q96K78 797 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 FOXB1Q99853 325 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 SLC6A7Q99884 636 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 FOXC2Q99958 501 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 TM2D1Q9BX74 207 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 METTL9Q9H1A3 318 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 RNF122Q9H9V4 155 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 MYEF2Q9P2K5 600 aaKnown RBP11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 KIF25Q9UIL4 384 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 EDARQ9UNE0 448 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 PIGLQ9Y2B2 252 aa11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 NOP16Q9Y3C1 178 aaKnown RBP11.19□□□□□ -0.62
SMARCB1-203ENST00000407082 INTS1Q8N201 2190 aaKnown RBP11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 IGKV3D-15A0A087WSY6 115 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 A0A0B4J2A0 478 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 E9PLN8 166 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 SYNGR3O43761 229 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 TOXO94900 526 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 FCGR2AP12318 317 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF35P13682 527 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 RPA2P15927 270 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 GNB3P16520 340 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 OR3A4PP47883 348 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 LHX2P50458 406 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 AP2S1P53680 142 aaPredicted RBP11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 SRYQ05066 204 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 TMEM65Q6PI78 240 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 CD163Q86VB7 1156 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 OR52B4Q8NGK2 314 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 OR5M9Q8NGP3 310 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 TERB2Q8NHR7 220 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 NANOS1Q8WY41 292 aaKnown RBP11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 MRPS24Q96EL2 167 aaKnown RBP11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 VKORC1Q9BQB6 163 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 HEXA-AS1Q9H8Q6 139 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 ZMAT3Q9HA38 289 aaKnown RBP11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 CA10Q9NS85 328 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 SHPKQ9UHJ6 478 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 MCTS1Q9ULC4 181 aaKnown RBP11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 SLC7A11Q9UPY5 501 aa11.18□□□□□ -0.62
SMARCB1-203ENST00000407082 MRPL33O75394 65 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 IL2RAP01589 272 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 CD8AP01732 235 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 HLA-AP01891 365 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 CSTBP04080 98 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 COX5BP10606 129 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 CRYGSP22914 178 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 HRH1P35367 487 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 ATP1B3P54709 279 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 IL13RA1P78552 427 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 DHRS2Q13268 280 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms