RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 ANOS1P23352 680 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-206ENST00000405546 HLA-BQ31612 363 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 C1orf100Q5SVJ3 147 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 P4HA3Q7Z4N8 544 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 DMRT1Q9Y5R6 373 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 FREM2Q5SZK8 3169 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 DBHP09172 617 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
ATG4B-206ENST00000405546 FCGR2AP12318 317 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 TMEM33P57088 247 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 FAM180AQ6UWF9 173 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 OR5H2Q8NGV7 314 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 OR14K1Q8NGZ2 314 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 SMIM8Q96KF7 97 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 SSX3Q99909 188 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 KCNJ16Q9NPI9 418 aa13.19□□□□□ -0.3
ATG4B-206ENST00000405546 SOX15O60248 233 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 FOSL2P15408 326 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 RPL12P30050 165 aaKnown RBP13.18□□□□□ -0.3
ATG4B-206ENST00000405546 PPP1CCP36873 323 aaKnown RBP13.18□□□□□ -0.3
ATG4B-206ENST00000405546 SSBP1Q04837 148 aaKnown RBP13.18□□□□□ -0.3
ATG4B-206ENST00000405546 PRSS54Q6PEW0 395 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 BTNL8Q6UX41 500 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 HLA-CQ95604 372 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 URM1Q9BTM9 101 aaKnown RBP13.18□□□□□ -0.3
ATG4B-206ENST00000405546 K7EPK0 472 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 SRSF10O75494 262 aaKnown RBP13.18□□□□□ -0.3
ATG4B-206ENST00000405546 BPNT1O95861 308 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 CSTBP04080 98 aaKnown RBP13.18□□□□□ -0.3
ATG4B-206ENST00000405546 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 CCL4P13236 92 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 MSX1P28360 303 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 RGS19P49795 217 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 TLE1Q04724 770 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 FAM71E2Q8N5Q1 922 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 KCNG3Q8TAE7 436 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 DNASE2BQ8WZ79 361 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 OXGR1Q96P68 337 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 GAR1Q9NY12 217 aaKnown RBP13.18□□□□□ -0.3
ATG4B-206ENST00000405546 TIMM10BQ9Y5J6 103 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 FLVCR1Q9Y5Y0 555 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 KPTNQ9Y664 436 aa13.18□□□□□ -0.3
ATG4B-206ENST00000405546 IL2RAP01589 272 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 PATE4P0C8F1 98 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 PGA4P0DJD7 388 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 PGA3P0DJD8 388 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 FOLR2P14207 255 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 SSX2Q16385 188 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 OR2M3Q8NG83 312 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 OR9K2Q8NGE7 335 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 FAM213BQ8TBF2 198 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 AQP3Q92482 292 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 ZNF385AQ96PM9 386 aaKnown RBP13.17□□□□□ -0.3
ATG4B-206ENST00000405546 DUSP23Q9BVJ7 150 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 TREM2Q9NZC2 230 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 EHFQ9NZC4 300 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 NCOA6Q14686 2063 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-206ENST00000405546 FAM230AA0A1W2PPH8 454 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 PATE3B3GLJ2 98 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 PHOX2AO14813 284 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 TRAF3IP2O43734 574 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-206ENST00000405546 RAB5CP51148 216 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 SUMO3P55854 103 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-206ENST00000405546 NSUN5P2Q63ZY6 315 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 CARFQ8N187 725 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 THOC3Q96J01 351 aaKnown RBP13.17□□□□□ -0.3
ATG4B-206ENST00000405546 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 IFNA17P01571 189 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 ABHD14AQ9BUJ0 271 aa13.17□□□□□ -0.3
ATG4B-206ENST00000405546 A0A087X0M5 115 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 A0A1B0GX30 115 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 BTBD17A6NE02 478 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 HKR1P10072 659 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 EPHA8P29322 1005 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-206ENST00000405546 SHBQ15464 509 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 HAGHQ16775 308 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 BRICD5Q6PL45 260 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 C1QL2Q7Z5L3 287 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 YRDCQ86U90 279 aaKnown RBP13.16□□□□□ -0.3
ATG4B-206ENST00000405546 OR2AE1Q8NHA4 323 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 LPAR5Q9H1C0 372 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 TGIF2-C20orf24A0A0A6YYL0 155 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 CDRT15L2A8MXV6 281 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 ZNHIT1O43257 154 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 ANGPTL7O43827 346 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 CCL3P10147 92 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 PNLIPP16233 465 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
ATG4B-206ENST00000405546 SPEM2Q0P670 501 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 TMEM182Q6ZP80 229 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-206ENST00000405546 TERB2Q8NHR7 220 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 MRPL13Q9BYD1 178 aaKnown RBP13.16□□□□□ -0.3
ATG4B-206ENST00000405546 ULBP2Q9BZM5 246 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
ATG4B-206ENST00000405546 OR10A2Q9H208 303 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms