RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 BLVRBP30043 206 aaPredicted RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 RANBP1P43487 201 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 RPS27AP62979 156 aaKnown RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 ZNF154Q13106 437 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 TRIM16LQ309B1 348 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 CDNFQ49AH0 187 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 PRAMEF6Q5VXH4 476 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 RAB12Q6IQ22 244 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 BRICD5Q6PL45 260 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 Q6ZTK2 550 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 SSX8Q7RTT4 187 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 WDR86Q86TI4 376 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 TOMM5Q8N4H5 51 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 SCCPDHQ8NBX0 429 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 OR10R2Q8NGX6 335 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ITLN2Q8WWU7 325 aaPredicted RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 PTX4Q96A99 478 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 RAB3CQ96E17 227 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ELMOD3Q96FG2 381 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ARHGAP5-AS1Q96IT6 56 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 CYYR1Q96J86 154 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 OR10A4Q9H209 315 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 PLK3Q9H4B4 646 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 MTCH1Q9NZJ7 389 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ST3GAL6Q9Y274 331 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 A0A1B0GVG6 124 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ZSCAN5BA6NJL1 495 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 OR7C1O76099 320 aaPredicted RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 PLAUP00749 431 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 IGHV3-13P01766 116 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 CPT2P23786 658 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 PRSS3P35030 304 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 GDNFP39905 211 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 HOXA4Q00056 320 aaPredicted RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 TFF3Q07654 80 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 MAB21L1Q13394 359 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 GPR176Q14439 515 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 MPPED2Q15777 294 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 NCMAPQ5T1S8 102 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 OLFML2AQ68BL7 652 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ZNF826PQ6ZT77 177 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 MKXQ8IYA7 352 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ZCCHC24Q8N2G6 241 aaKnown RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 OSR2Q8N2R0 312 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 NUP37Q8NFH4 326 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 PXT1Q8NFP0 134 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 OR56B1Q8NGI3 324 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 SMIM4Q8WVI0 70 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 NUDCD2Q8WVJ2 157 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 YIPF5Q969M3 257 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 MRPL24Q96A35 216 aaKnown RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 PIK3IP1Q96FE7 263 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 HS3ST6Q96QI5 342 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 OR51I2Q9H344 312 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 NPDC1Q9NQX5 325 aaPredicted RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 PLEKHJ1Q9NW61 149 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 ZNF581Q9P0T4 197 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 IL36RNQ9UBH0 155 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 TBC1D24Q9ULP9 559 aa3.16□□□□□ -1.9
RTN4-208ENST00000404909 HELZ2Q9BYK8 2649 aaKnown RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 MAP1AP78559 2803 aaPredicted RBP3.16□□□□□ -1.9
RTN4-208ENST00000404909 CRYBG3Q68DQ2 2970 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 ISPDA4D126 451 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 LRP5LA4QPB2 252 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 GABARAPH6UMI1 98 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 HSPB6O14558 160 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 TPD52L2O43399 206 aaKnown RBP3.15□□□□□ -1.9
RTN4-208ENST00000404909 ORC5O43913 435 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 SSX4O60224 188 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 CHRM2P08172 466 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 PRKACAP17612 351 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 KIR2DL3P43628 341 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 ZNF81P51508 661 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 SORDQ00796 357 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 ADIPOQQ15848 244 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 BEX5Q5H9J7 111 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 PLAC9Q5JTB6 97 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 ATAD3CQ5T2N8 411 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 C6orf201Q7Z4U5 140 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 CENPSQ8N2Z9 138 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 ZNF808Q8N4W9 903 aaPredicted RBP3.15□□□□□ -1.9
RTN4-208ENST00000404909 C15orf40Q8WUR7 153 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 AQP3Q92482 292 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 EMG1Q92979 244 aaKnown RBP3.15□□□□□ -1.9
RTN4-208ENST00000404909 Q96M66 194 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 SLC22A4Q9H015 551 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 C11orf54Q9H0W9 315 aaPredicted RBP3.15□□□□□ -1.9
RTN4-208ENST00000404909 CXXC4Q9H2H0 198 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 PCDHB16Q9NRJ7 776 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 TREM2Q9NZC2 230 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 FBLN5Q9UBX5 448 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 NOP16Q9Y3C1 178 aaKnown RBP3.15□□□□□ -1.9
RTN4-208ENST00000404909 RNF115Q9Y4L5 304 aa3.15□□□□□ -1.9
RTN4-208ENST00000404909 HRNRQ86YZ3 2850 aaPredicted RBP3.15□□□□□ -1.9
RTN4-208ENST00000404909 USP9YO00507 2555 aaPredicted RBP3.15□□□□□ -1.91
RTN4-208ENST00000404909 IGLV3-9A0A075B6K5 115 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 WIPF3A6NGB9 483 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 VSTM5A8MXK1 200 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 SHISA9B4DS77 424 aa3.15□□□□□ -1.91
RTN4-208ENST00000404909 J3QT63 122 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms