RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 HAAOP46952 286 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 NKX6-1P78426 367 aaPredicted RBP17.93■□□□□ 0.46
TPM1-208ENST00000404484 MOGAT2Q3SYC2 334 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 SLC25A26Q70HW3 274 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 GDPD3Q7L5L3 318 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 OR10K1Q8NGX5 313 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 ENKURQ8TC29 256 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 AQP3Q92482 292 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 RAB3CQ96E17 227 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 PKIBQ9C010 78 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 RBFOX1Q9NWB1 397 aaKnown RBP17.93■□□□□ 0.46
TPM1-208ENST00000404484 DCHS2Q6V1P9 2916 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 ABCA12Q86UK0 2595 aa17.93■□□□□ 0.46
TPM1-208ENST00000404484 A0A1B0GVG6 124 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 TMEM210A6NLX4 147 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 H7C417 338 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 ORC5O43913 435 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 COX6B1P14854 86 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 IGFBP2P18065 325 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 ACTBP60709 375 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 ACTG1P63261 375 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 MZT1Q08AG7 82 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 OR8G1Q15617 311 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 ZNF260Q3ZCT1 412 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 CALHM1Q8IU99 346 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 SPERTQ8NA61 448 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 GCDHQ92947 438 aaPredicted RBP17.92■□□□□ 0.46
TPM1-208ENST00000404484 SPOCK3Q9BQ16 436 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 FGF23Q9GZV9 251 aaPredicted RBP17.92■□□□□ 0.46
TPM1-208ENST00000404484 HEATR1Q9H583 2144 aaKnown RBP17.92■□□□□ 0.46
TPM1-208ENST00000404484 MTFP1Q9UDX5 166 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 CACNG2Q9Y698 323 aa17.92■□□□□ 0.46
TPM1-208ENST00000404484 AKR7A2O43488 359 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 MELTFP08582 738 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 ZNF250P15622 560 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 FABP6P51161 128 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 CDNFQ49AH0 187 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 Q6ZTK2 550 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 NRARPQ7Z6K4 114 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 OSR2Q8N2R0 312 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 NUP37Q8NFH4 326 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 GPX8Q8TED1 209 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 DVL3Q92997 716 aaPredicted RBP17.91■□□□□ 0.46
TPM1-208ENST00000404484 ZC3HAV1LQ96H79 300 aaKnown RBP17.91■□□□□ 0.46
TPM1-208ENST00000404484 RADILQ96JH8 1075 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 Q96M66 194 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 NICN1Q9BSH3 213 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 PRR14LQ5THK1 2151 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 A0A0A6YYD4 124 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 LRP5LA4QPB2 252 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 J3QT63 122 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 THBDP07204 575 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 HIST1H1DP16402 221 aaKnown RBP17.91■□□□□ 0.46
TPM1-208ENST00000404484 SELENOVP59797 346 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 SORDQ00796 357 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 KLF9Q13886 244 aaPredicted RBP17.91■□□□□ 0.46
TPM1-208ENST00000404484 PNLIPRP3Q17RR3 467 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 MEX3BQ6ZN04 569 aaKnown RBP17.91■□□□□ 0.46
TPM1-208ENST00000404484 Q8NFD4 153 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 OR13G1Q8NGZ3 307 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 RHOFQ9HBH0 211 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 NDRG3Q9UGV2 375 aa17.91■□□□□ 0.46
TPM1-208ENST00000404484 IGKV1-12A0A0C4DH73 117 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 FAM240BA0A1B0GVZ2 78 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 ANKRD20A5PA0PJZ0 165 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 MEIOCA2RUB1 952 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 TMEM235A6NFC5 223 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 ATP6V1G2-DDX39BF2Z307 99 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 TRAPPC2LH3BP13 241 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 IGKV1D-12P01611 117 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 CSF1P09603 554 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 PTHLHP12272 177 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 RFX2P48378 723 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 KLF3P57682 345 aaPredicted RBP17.9■□□□□ 0.46
TPM1-208ENST00000404484 IL24Q13007 206 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 ALKBH6Q3KRA9 238 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 ELP2Q6IA86 826 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 HAGHLQ6PII5 290 aaPredicted RBP17.9■□□□□ 0.46
TPM1-208ENST00000404484 CCBE1Q6UXH8 406 aaPredicted RBP17.9■□□□□ 0.46
TPM1-208ENST00000404484 C22orf34Q6ZV56 151 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 OR51I2Q9H344 312 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.9■□□□□ 0.46
TPM1-208ENST00000404484 KLK11Q9UBX7 282 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 ZNF107Q9UII5 783 aaPredicted RBP17.9■□□□□ 0.46
TPM1-208ENST00000404484 POLDIP2Q9Y2S7 368 aa17.9■□□□□ 0.46
TPM1-208ENST00000404484 NAP1L6A6NFF2 107 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 SOCS1O15524 211 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 IGHV3-13P01766 116 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 MPZP25189 248 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 BLVRBP30043 206 aaPredicted RBP17.89■□□□□ 0.45
TPM1-208ENST00000404484 FAUP35544 74 aaKnown RBP17.89■□□□□ 0.45
TPM1-208ENST00000404484 FAM76BQ5HYJ3 339 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 DMRTC2Q8IXT2 367 aaPredicted RBP17.89■□□□□ 0.45
TPM1-208ENST00000404484 SEH1LQ96EE3 360 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 WFIKKN1Q96NZ8 548 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 CXXC4Q9H2H0 198 aa17.89■□□□□ 0.45
TPM1-208ENST00000404484 H3BUI4 141 aa17.88■□□□□ 0.45
TPM1-208ENST00000404484 GNB3P16520 340 aa17.88■□□□□ 0.45
TPM1-208ENST00000404484 SRP9P49458 86 aaKnown RBP17.88■□□□□ 0.45
TPM1-208ENST00000404484 GNG2P59768 71 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms