RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 ZNF610Q8N9Z0 462 aa11.24□□□□□ -0.61
NDEL1-203ENST00000402554 GIMAP1Q8WWP7 306 aa11.24□□□□□ -0.61
NDEL1-203ENST00000402554 ARHGAP5-AS1Q96IT6 56 aa11.24□□□□□ -0.61
NDEL1-203ENST00000402554 OPN3Q9H1Y3 402 aaPredicted RBP11.24□□□□□ -0.61
NDEL1-203ENST00000402554 CDH20Q9HBT6 801 aa11.24□□□□□ -0.61
NDEL1-203ENST00000402554 KCNJ16Q9NPI9 418 aa11.24□□□□□ -0.61
NDEL1-203ENST00000402554 EIF3KQ9UBQ5 218 aaKnown RBP11.24□□□□□ -0.61
NDEL1-203ENST00000402554 CD300LBA8K4G0 201 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 FOXI3A8MTJ6 420 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 EEF1E1-BLOC1S5C9J1V9 151 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 MFNGO00587 321 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 ICMTO60725 284 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 PRAF2O60831 178 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 HTR3BO95264 441 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 CD74P04233 296 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 CELA3BP08861 270 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 BLVRBP30043 206 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 P2RY6Q15077 328 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 RBMS2Q15434 407 aaKnown RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 RTN4RL2Q86UN3 420 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 ZDHHC23Q8IYP9 409 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 PXT1Q8NFP0 134 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 OR51S1Q8NGJ8 323 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 MED28Q9H204 178 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 OR51J1Q9H342 316 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 IFT46Q9NQC8 304 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 SSX5O60225 188 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 CBR1P16152 277 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 CD83Q01151 205 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 PDZK1IP1Q13113 114 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 CBX3Q13185 183 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 MEF2DQ14814 521 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 ARL6IP1Q15041 203 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 CXorf67Q86X51 503 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 C17orf78Q8N4C9 275 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 WDR31Q8NA23 367 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 DACT3Q96B18 629 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 GINS4Q9BRT9 223 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 BEX2Q9BXY8 128 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 TINAGL1Q9GZM7 467 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 BEX1Q9HBH7 125 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 RANGRFQ9HD47 186 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.23□□□□□ -0.61
NDEL1-203ENST00000402554 IL36GQ9NZH8 169 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 KCNK7Q9Y2U2 307 aa11.23□□□□□ -0.61
NDEL1-203ENST00000402554 PQLC2LA1A4F0 135 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 ANKRD30BLA7E2S9 258 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 M0QYG6 137 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 CEACAM21Q3KPI0 293 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 BEND4Q6ZU67 534 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 GVQW1Q8N7I0 195 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 OR4S1Q8NGB4 309 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 Q96M66 194 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 PCDHB16Q9NRJ7 776 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 CRIM1Q9NZV1 1036 aa11.22□□□□□ -0.61
NDEL1-203ENST00000402554 IGKV1-12A0A0C4DH73 117 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 SMPD2O60906 423 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 IGKV1D-12P01611 117 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 AMY2AP04746 511 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 IL32P24001 234 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 GABRR1P24046 479 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 CBX5P45973 191 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 ARFRP1Q13795 201 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 ZFP69Q49AA0 526 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 RNASE10Q5GAN6 216 aaKnown RBP11.21□□□□□ -0.61
NDEL1-203ENST00000402554 MEX3BQ6ZN04 569 aaKnown RBP11.21□□□□□ -0.61
NDEL1-203ENST00000402554 BHLHA15Q7RTS1 189 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-203ENST00000402554 ZSCAN4Q8NAM6 433 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-203ENST00000402554 OR51F2Q8NH61 342 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 DMRTB1Q96MA1 342 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 HIST1H2AAQ96QV6 131 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 PECRQ9BY49 303 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 OBP2BQ9NPH6 170 aa11.21□□□□□ -0.61
NDEL1-203ENST00000402554 ZNF629Q9UEG4 869 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-203ENST00000402554 SERPINE3A8MV23 424 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 DISC1C4P0D8 188 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 IGKV3-15P01624 115 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 TBPP20226 339 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 RAD52P43351 418 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.62
NDEL1-203ENST00000402554 PPP1CBP62140 327 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 FCN2Q15485 313 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 SPATA46Q5T0L3 261 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 METTL11BQ5VVY1 283 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 CD276Q5ZPR3 534 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 FBXW12Q6X9E4 464 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 CALHM1Q8IU99 346 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 TCTE3Q8IZS6 198 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 BPIFB2Q8N4F0 458 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 ZNF611Q8N823 705 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 BHLHE23Q8NDY6 225 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 BEST4Q8NFU0 473 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 HPSE2Q8WWQ2 592 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 ST8SIA4Q92187 359 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 MARVELD3Q96A59 401 aa11.21□□□□□ -0.62
NDEL1-203ENST00000402554 MRPS24Q96EL2 167 aaKnown RBP11.21□□□□□ -0.62
NDEL1-203ENST00000402554 FYTTD1Q96QD9 318 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms