RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PIK3IP1Q96FE7 263 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 DOK1Q99704 481 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 CGB1A6NKQ9 187 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 F2RL2O00254 374 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 EML2O95834 649 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 TCL1AP56279 114 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 NHLH1Q02575 133 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 NHLH2Q02577 135 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 ITPKCQ96DU7 683 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
VAPA-202ENST00000400000 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
VAPA-202ENST00000400000 OR4A8P0C604 315 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 ETV6P41212 452 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 FOXO1Q12778 655 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 SSPNQ14714 243 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
VAPA-202ENST00000400000 SCPEP1Q9HB40 452 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 NINQ8N4C6 2090 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 LALBAP00709 142 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 CD3EP07766 207 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 BCL3P20749 454 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 PLAURQ03405 335 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 FAHD2BQ6P2I3 314 aaPredicted RBP12.25□□□□□ -0.45
VAPA-202ENST00000400000 OR5D13Q8NGL4 314 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 FAHD2AQ96GK7 314 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 FAM60AQ9NP50 221 aa12.25□□□□□ -0.45
VAPA-202ENST00000400000 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
VAPA-202ENST00000400000 IGHV1OR21-1A0A087WYE8 117 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 OR5AL1P0C617 328 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 RABAC1Q9UI14 185 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 ANKRD34CP0C6C1 535 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 CHRNA7P36544 502 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 TSPAN32Q96QS1 320 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 CXCL10P02778 98 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 MIDNQ504T8 468 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 LINC01555Q8NAE3 123 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 RND1Q92730 232 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 TCRBV5S2A0A599 114 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 A1L4Q6 167 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 TRIM77I1YAP6 450 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 OR10AC1Q8NH08 325 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 NT5CQ8TCD5 201 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 NPAP1Q9NZP6 1156 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 RAF1P04049 648 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 CYC1P08574 325 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 EPXP11678 715 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 DHODHQ02127 395 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 LFNGQ8NES3 379 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 DYNLRB2Q8TF09 96 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 DPH3Q96FX2 82 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 TMEM204Q9BSN7 226 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 ZNF586Q9NXT0 402 aa12.24□□□□□ -0.45
VAPA-202ENST00000400000 TMSB15BA0A087X1C1 80 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 CD37P11049 281 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 HTRA4P83105 476 aaPredicted RBP12.23□□□□□ -0.45
VAPA-202ENST00000400000 ZNF141Q15928 474 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 MUC15Q8N387 334 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 FAM24AA6NFZ4 105 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 LHX9Q9NQ69 397 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 WNT16Q9UBV4 365 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 HRKO00198 91 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 GLULP15104 373 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 THBS4P35443 961 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 GGTLC2Q14390 218 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 CBLN3Q6UW01 205 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 OTOSQ8NHW6 89 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 CACNG5Q9UF02 275 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 ADRB1P08588 477 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 LINC01465Q8N7H1 131 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 CIB3Q96Q77 187 aaPredicted RBP12.23□□□□□ -0.45
VAPA-202ENST00000400000 PIGMQ9H3S5 423 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 PARD6AQ9NPB6 346 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 ERVS71-1P61550 626 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 LSM11P83369 360 aaKnown RBP eCLIP12.23□□□□□ -0.45
VAPA-202ENST00000400000 ABHD3Q8WU67 409 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 FUT3P21217 361 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 PRDM7Q9NQW5 492 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 AP5S1Q9NUS5 200 aa12.23□□□□□ -0.45
VAPA-202ENST00000400000 ZMAT5Q9UDW3 170 aaKnown RBP12.23□□□□□ -0.45
VAPA-202ENST00000400000 IGKV3D-11A0A0A0MRZ8 115 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 TRBV23-1A0A0A0MS06 115 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 RHBDL1O75783 438 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 IGKV3-11P04433 115 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 PRRX1P54821 245 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 DND1Q8IYX4 353 aaKnown RBP12.22□□□□□ -0.45
VAPA-202ENST00000400000 OR13G1Q8NGZ3 307 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 MVB12AQ96EY5 273 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 GABARAPL3Q9BY60 117 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 SSC5DA1L4H1 1573 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.22□□□□□ -0.45
VAPA-202ENST00000400000 TNFSF14O43557 240 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 EPPINO95925 133 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 GALR1P47211 349 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 TPBGQ13641 420 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 MAP6Q96JE9 813 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 RNASE1P07998 156 aaKnown RBP12.22□□□□□ -0.45
VAPA-202ENST00000400000 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms