RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 FBXO17Q96EF6 278 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 ASF1BQ9NVP2 202 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 PCP4L1A6NKN8 68 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 H7C1Q1 480 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 GABRA1P14867 456 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF92Q03936 586 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 MOGAT2Q3SYC2 334 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 OR11L1Q8NGX0 322 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 RTN4IP1Q8WWV3 396 aaPredicted RBP12.27□□□□□ -0.45
SCAF4-202ENST00000399804 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF649Q9BS31 505 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 PLK3Q9H4B4 646 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF703Q9H7S9 590 aaPredicted RBP12.27□□□□□ -0.45
SCAF4-202ENST00000399804 ENY2Q9NPA8 101 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 GLRX2Q9NS18 164 aa12.27□□□□□ -0.45
SCAF4-202ENST00000399804 CYTIPO60759 359 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PDCD6O75340 191 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 TPPPO94811 219 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 OMGP23515 440 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PIGPP57054 158 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PPP1CBP62140 327 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PPP1R1AQ13522 171 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 TMUB2Q71RG4 321 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 OR4D10Q8NGI6 311 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 UBALD1Q8TB05 177 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 ADAT1Q9BUB4 502 aaKnown RBP12.26□□□□□ -0.45
SCAF4-202ENST00000399804 TMPRSS13Q9BYE2 586 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 MEIKINA0A087WXM9 373 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 TUSC2O75896 110 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 CTXN2P0C2S0 81 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 OR8B8Q15620 311 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 SNAI3Q3KNW1 292 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PXDC1Q5TGL8 231 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 OR14K1Q8NGZ2 314 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 STOML3Q8TAV4 291 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PPP1R1CQ8WVI7 109 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 MED30Q96HR3 178 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PRSS50Q9UI38 385 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 WDR1O75083 606 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 ATG12O94817 140 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 LUMP51884 338 aaPredicted RBP12.26□□□□□ -0.45
SCAF4-202ENST00000399804 RPS27AP62979 156 aaKnown RBP12.26□□□□□ -0.45
SCAF4-202ENST00000399804 FHL1Q13642 323 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 C1orf100Q5SVJ3 147 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 C10orf128Q5T292 105 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 RGS7BPQ6MZT1 257 aaPredicted RBP12.26□□□□□ -0.45
SCAF4-202ENST00000399804 SLC51BQ86UW2 128 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 TMEM200AQ86VY9 491 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 SOX7Q9BT81 388 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 PECRQ9BY49 303 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 STARD10Q9Y365 291 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 E9PQ18 207 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 GEMIN2O14893 280 aaKnown RBP12.26□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF524Q96C55 264 aa12.26□□□□□ -0.45
SCAF4-202ENST00000399804 GMPPAQ96IJ6 420 aaPredicted RBP12.26□□□□□ -0.45
SCAF4-202ENST00000399804 CDX4O14627 284 aaPredicted RBP12.25□□□□□ -0.45
SCAF4-202ENST00000399804 AGPAT2O15120 278 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 PSMB6P28072 239 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 PTGDSP41222 190 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 NHLRC1Q6VVB1 395 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 MDP1Q86V88 176 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 PRO3102Q9H379 93 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 TERTO14746 1132 aaKnown RBP12.25□□□□□ -0.45
SCAF4-202ENST00000399804 RPS23P62266 143 aaKnown RBP12.25□□□□□ -0.45
SCAF4-202ENST00000399804 TSC22D1Q15714 1073 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 FAM58AQ8N1B3 248 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 TMEM185AQ8NFB2 350 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 DLL4Q9NR61 685 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 CSAG2Q9Y5P2 127 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 SPTBN1Q01082 2364 aaKnown RBP12.25□□□□□ -0.45
SCAF4-202ENST00000399804 NUPL2O15504 423 aaKnown RBP12.25□□□□□ -0.45
SCAF4-202ENST00000399804 NME2P1O60361 137 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 AGFG2O95081 481 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 WISP1O95388 367 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 NME2P22392 152 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 EIF2S3P41091 472 aaKnown RBP12.25□□□□□ -0.45
SCAF4-202ENST00000399804 ENDOGQ14249 297 aaKnown RBP12.25□□□□□ -0.45
SCAF4-202ENST00000399804 SP6Q3SY56 376 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 ZDHHC22Q8N966 263 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF709Q8N972 641 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 SCMH1Q96GD3 660 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 TIMP4Q99727 224 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 CHST6Q9GZX3 395 aa12.25□□□□□ -0.45
SCAF4-202ENST00000399804 CAMLGP49069 296 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 SRPXP78539 464 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF169Q14929 603 aaPredicted RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF626Q68DY1 528 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 OR5AP2Q8NGF4 316 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 TMEM54Q969K7 222 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 PTX4Q96A99 478 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 GSX2Q9BZM3 304 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ZNF705EA8MWA4 302 aaPredicted RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 GLAP06280 429 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 UBA52P62987 128 aaKnown RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 PLA2G7Q13093 441 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 NUFIP2Q7Z417 695 aaKnown RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 CISD2Q8N5K1 135 aaKnown RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 MRPS24Q96EL2 167 aaKnown RBP12.24□□□□□ -0.45
SCAF4-202ENST00000399804 ATP23Q9Y6H3 246 aa12.24□□□□□ -0.45
SCAF4-202ENST00000399804 MEX3AA1L020 520 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms