RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 NXPH1P58417 271 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 RELQ04864 619 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 Q5PR19 223 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 OR2G6Q5TZ20 316 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 OTPQ5XKR4 325 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 MOGAT3Q86VF5 341 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 OR10Z1Q8NGY1 313 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 BCL7CQ8WUZ0 217 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 SPACA5Q96QH8 159 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 GABARAPL3Q9BY60 117 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 MS4A5Q9H3V2 200 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 MRPS18BQ9Y676 258 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 INHBBP09529 407 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 KIR2DL1P43626 348 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 KIR2DL2P43627 348 aaPredicted RBP9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 NOXO1Q8NFA2 376 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 DUX5Q96PT3 197 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 STRAPQ9Y3F4 350 aaKnown RBP9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 CEP290O15078 2479 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 KNTC1P50748 2209 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 TMEM262E9PQX1 116 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 FXYD1O00168 92 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 DIO1P49895 249 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 C19orf54Q5BKX5 351 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 C1QL3Q5VWW1 255 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 ADGRE4PQ86SQ3 457 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 SLC38A6Q8IZM9 456 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 PGBD5Q8N414 524 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 PRSS3P2Q8NHM4 247 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 RCE1Q9Y256 329 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 TMEM82A0PJX8 343 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 PRSS23O95084 383 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 IL5P05113 134 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 RAB40ALP0C0E4 278 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 FGF7P21781 194 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 GFRA1P56159 465 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 FZD5Q13467 585 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 FCRL6Q6DN72 434 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 CHAC2Q8WUX2 184 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 RAB40AQ8WXH6 277 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 RTN4RQ9BZR6 473 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 TAF9BQ9HBM6 251 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 PARP11Q9NR21 331 aa9.81□□□□□ -0.84
CACNA1C-216ENST00000399638 DHHO43323 396 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 FCGR3BO75015 233 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 CD1EP15812 388 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 POLR2IP36954 125 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 ZNF85Q03923 595 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 CARFQ8N187 725 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 IGHV1OR21-1A0A087WYE8 117 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 SIAH2O43255 324 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 SLC25A5P05141 298 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 HMGA1P17096 107 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 AQP6Q13520 282 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 ACOT6Q3I5F7 207 aaPredicted RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 XAF1Q6GPH4 301 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 EBLN2Q6P2I7 272 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 RSG1Q9BU20 258 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 C11orf68Q9H3H3 251 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 RANGRFQ9HD47 186 aaPredicted RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 IGHV5-51A0A0C4DH38 117 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 DHRS3O75911 302 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 SOD1P00441 154 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 SNRPBP14678 240 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 GZMKP49863 264 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 FOXO1Q12778 655 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 OR8A1Q8NGG7 326 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 AQP10Q96PS8 301 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 ZNF768Q9H5H4 540 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 GLRX2Q9NS18 164 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 MARF1Q9Y4F3 1742 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 LOC100289279A0A1B0GTE1 492 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 GABRPO00591 440 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 SYNGR2O43760 224 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 FCARP24071 287 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 OR3A1P47881 315 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 RFESDQ8TAC1 157 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 ZNF2Q9BSG1 426 aaPredicted RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 ASCC3Q8N3C0 2202 aaKnown RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 TCF21O43680 179 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 SLC2A10O95528 541 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 CXCL10P02778 98 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 CHRM2P08172 466 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 ZNF121P58317 390 aaPredicted RBP9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 PXT1Q8NFP0 134 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 MRGPRX3Q96LB0 322 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 DDOQ99489 341 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 NRIP3Q9NQ35 241 aa9.8□□□□□ -0.84
CACNA1C-216ENST00000399638 A0A1W2PPQ1 181 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 RFPL4AA6NLU0 287 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 RFPL4AL1F8VTS6 287 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 SDHAP31040 664 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 EMDP50402 254 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 OR1F12Q8NHA8 337 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 ALX4Q9H161 411 aaPredicted RBP9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 PSG11Q9UQ72 335 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 TRAPPC1Q9Y5R8 145 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 LOC107986453A0A1B0GWG9 222 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 ARRB2P32121 409 aa9.79□□□□□ -0.84
CACNA1C-216ENST00000399638 RNF165Q6ZSG1 346 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms